WormBase Tree Display for Gene: WBGene00001073
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WBGene00001073 | Evidence | CGC_data_submission | ||||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F46E10 | |||
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | dpy | |||||
Reference_allele | WBVar00143044 | |||||
Allele (97) | ||||||
Legacy_information | e224 : medium dumpy. ES3 (adult) ES2 (larvae). ME2. NA > 10 (e33 e1180icr (these and most other alleles have much stronger dumpy ('piggy') phenotype) etc.). | |||||
See also e33, e752, e1180, e1194, s360 | ||||||
[C.elegansII] e224 : medium dumpy. ES3 (adult) ES2 (larvae). ME2. Males Ram (lumpy rays) at25C. OA>10: e33, e1180icr (these and most other alleles have much stronger dumpy or 'piggy' phenotype) etc.), e455,e733, e752, s287 (induced on eT1), s10, s261, s360fdi etc. [Brenner 1974; Baird and Emmons 1990; CB] | ||||||
Strain (139) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00011338 | |||||
00011339 | ||||||
00011340 | ||||||
00011341 | ||||||
00011342 | ||||||
00011343 | ||||||
00011344 | ||||||
00011345 | ||||||
00011346 | ||||||
Contained_in_operon | CEOP5120 | |||||
Ortholog (41) | ||||||
Paralog (14) | ||||||
Structured_description | Automated_description | Enables protein-disulfide reductase activity. Involved in several processes, including cuticle development involved in collagen and cuticulin-based cuticle molting cycle; post-embryonic body morphogenesis; and protein folding. Located in endomembrane system. Expressed in several structures, including R1_hyp; R2_hyp; R3_hyp; R4_hyp; and R5_hyp. Is an ortholog of human TMX1 (thioredoxin related transmembrane protein 1). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | F46E10.9 | ||||
Corresponding_transcript | F46E10.9.1 | |||||
F46E10.9.2 | ||||||
Other_sequence (67) | ||||||
Associated_feature (20) | ||||||
Experimental_info | RNAi_result (20) | |||||
Expr_pattern | Chronogram1745 | |||||
Expr1854 | ||||||
Expr1855 | ||||||
Expr6089 | ||||||
Expr13275 | ||||||
Expr1026593 | ||||||
Expr1030681 | ||||||
Expr1151367 | ||||||
Expr2011056 | ||||||
Expr2029293 | ||||||
Drives_construct | WBCnstr00002463 | |||||
WBCnstr00010487 | ||||||
WBCnstr00010488 | ||||||
WBCnstr00042718 | ||||||
Construct_product | WBCnstr00010488 | |||||
Microarray_results (22) | ||||||
Expression_cluster (192) | ||||||
Interaction (155) | ||||||
WBProcess | WBbiopr:00000124 | |||||
Map_info | Map | V | Position | 0 | ||
Well_ordered | ||||||
Positive | Inside_rearr | sDf20 | ||||
sDf30 | ||||||
nDf1 | ||||||
nDf18 | ||||||
rT1 | ||||||
Positive_clone | F46E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
T04F11 | ||||||
Negative | Outside_rearr | sDf36 | ||||
eDf1 | ||||||
nDf42 | ||||||
Negative_clone | W01A11 | |||||
Mapping_data | 2_point (100) | |||||
Multi_point (259) | ||||||
Pos_neg_data (15) | ||||||
Landmark_gene | ||||||
Reference (113) | ||||||
Remark | Julia Pak rescued dpy-11 with T04F11 when she was a rotation student in my lab. | |||||
Sequence connection from [Ko F] | ||||||
Method | Gene |