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WormBase Tree Display for Gene: WBGene00001081

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Name Class

WBGene00001081EvidencePaper_evidenceWBPaper00005632
SMapS_parentSequenceF47A4
IdentityVersion1
NameCGC_namedpy-22Person_evidenceWBPerson261
Sequence_nameF47A4.2
Molecular_nameF47A4.2
F47A4.2.1
CE16058
Other_namepsa-6
sop-1
mdt-12Author_evidenceBourbon H-M
CELE_F47A4.2Accession_evidenceNDBBX284606
Public_namedpy-22
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:23WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Disease_infoPotential_modelDOID:14711Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11957)
DOID:591Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11957)
DOID:1967Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11957)
DOID:1470Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11957)
DOID:0080985Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11957)
Molecular_infoCorresponding_CDSF47A4.2
Corresponding_transcriptF47A4.2.1
Other_sequenceJI164168.1
ACC20072_1
JI164145.1
FC543403.1
Associated_featureWBsf670899
WBsf670900
WBsf1006541
WBsf1023629
WBsf237797
Transcription_factorWBTranscriptionFactor000276
Experimental_infoRNAi_result (77)
Expr_patternChronogram1297
Expr2021
Expr2271
Expr3489
Expr13299
Expr1022403
Expr1030688
Expr1151427
Expr2011065
Expr2029302
Drives_constructWBCnstr00003476
WBCnstr00010744
WBCnstr00011421
WBCnstr00037092
Construct_productWBCnstr00010744
WBCnstr00011421
WBCnstr00016104
WBCnstr00037092
Microarray_results (20)
Expression_clusterWBPaper00029359_1280
WBPaper00029359_1444
WBPaper00029359_1504
WBPaper00029359_1604
WBPaper00032031:DConiospora_downregulated_cDNA_12h
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037946:LIN-39_interacting
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_embryo_enriched
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00041222:unc-120(st364)_downregulated
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Oogenic
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049217:DAF-16_upregulated
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00051558:fog-2(q71)_regulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053321:embryo-to-L1_downregulated_WT_SMARTseq
WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055344:hypoxia_regulated_HIF-1_independent
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055969:electromagnetic-field_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056731:human-amylin_upregulated
WBPaper00056855:his-72(uge40)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058691:set-2(bn129)_downregulated
WBPaper00058958:100mGy-irradiation-72h_upregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060661:sensory-neuron_enriched
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061527:daf-1_17383-epc-1_15051
WBPaper00061527:utx-1_2886-swan-1_2192
WBPaper00062143:PQN-59_interacting
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062456:doxycycline_downregulated_CB4856_protein
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065158:AFD_enriched
WBPaper00065225:nhr-42(tm1375)_upregulated_S.aureus-infected
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065995:M.humicola-extract_downregulated_old-1(ok1273)
WBPaper00066110:Doxorubicin_downregulated_diploid
cgc4386_cluster_5_2
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025032:cluster_7
WBPaper00025032:cluster_17
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00030839:Embryo_A_Class
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00031003:hlh_1_enriched
WBPaper00032165:A_to_C_transit_increased
WBPaper00032165:differentially_expressed_with_age_medoid_1
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_I
WBPaper00040821:Au-NP_regulated
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042331:a-SWCNTs_downregulated
[cgc5767]:cluster_2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_ET
[cgc5767]:expression_class_ET_max(143_min)
[cgc5767]:expression_class_E_pi(66_min)
[cgc5767]:expression_class_E_pi(83_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SET
[cgc5767]:expression_class_SE_pi(66_min)
[cgc5767]:expression_class_SE_pi(83_min)
[cgc6390]:herm_sex-enriched
Interaction (126)
WBProcessWBbiopr:00000071
WBbiopr:00000072
Map_infoMapXPosition1.71011Error0.006646
Well_ordered
PositivePositive_cloneF47A4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point624
3153
3156
Multi_point531
532
533
1195
1196
3927
3928
3929
3930
4061
Pos_neg_data3154
249
872
Landmark_gene
Reference (63)
Remarkpsa-6 is allelic with dpy-22 [Sawa H]
sop-1 is allelic with dpy-22 [Sawa H]
MethodGene