WormBase Tree Display for Gene: WBGene00001514
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| WBGene00001514 | SMap | S_parent | Sequence | C05D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | xnd-1 | Person_evidence | WBPerson36 | |||||
| WBPerson2156 | |||||||||
| Sequence_name | C05D2.5 | ||||||||
| Molecular_name | C05D2.5 | ||||||||
| C05D2.5.1 | |||||||||
| CE26863 | |||||||||
| Other_name | gak-1 | Person_evidence | WBPerson36 | ||||||
| CELE_C05D2.5 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | xnd-1 | ||||||||
| DB_info | Database | AceView | gene | 3G695 | |||||
| WormQTL | gene | WBGene00001514 | |||||||
| WormFlux | gene | WBGene00001514 | |||||||
| NDB | locus_tag | CELE_C05D2.5 | |||||||
| NCBI | gene | 175776 | |||||||
| RefSeq | protein | NM_065806.9 | |||||||
| TREEFAM | TREEFAM_ID | TF320630 | |||||||
| TrEMBL | UniProtAcc | O45134 | |||||||
| UniProt_GCRP | UniProtAcc | O45134 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:24 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 15 Sep 2008 11:24:05 | WBPerson2970 | Name_change | CGC_name | xnd-1 | ||||
| Other_name | gak-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | xnd | ||||||||
| Allele (41) | |||||||||
| Strain | WBStrain00031581 | ||||||||
| WBStrain00031582 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00021890 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Expressed in several structures, including P4; Z2; Z3; germ line; and pharynx. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C05D2.5 | |||||||
| Corresponding_transcript | C05D2.5.1 | ||||||||
| Other_sequence | CBC03002_1 | ||||||||
| CJC15952_1 | |||||||||
| Associated_feature | WBsf658964 | ||||||||
| WBsf978814 | |||||||||
| WBsf992451 | |||||||||
| WBsf224968 | |||||||||
| Transcription_factor | WBTranscriptionFactor001128 | ||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr7413 | ||||||||
| Expr9146 | |||||||||
| Expr13418 | |||||||||
| Expr13419 | |||||||||
| Expr1013036 | |||||||||
| Expr1030910 | |||||||||
| Expr1143844 | |||||||||
| Expr2018097 | |||||||||
| Expr2036235 | |||||||||
| Drives_construct | WBCnstr00012556 | ||||||||
| WBCnstr00037972 | |||||||||
| Construct_product | WBCnstr00020942 | ||||||||
| WBCnstr00037972 | |||||||||
| Antibody | WBAntibody00002160 | ||||||||
| WBAntibody00002161 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (138) | |||||||||
| Map_info | Map | III | Position | -1.49264 | Error | 0.007921 | |||
| Positive | Positive_clone | C05D2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4332 | |||||||
| Pseudo_map_position | |||||||||
| Reference (25) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
