WormBase Tree Display for Gene: WBGene00001604
expand all nodes | collapse all nodes | view schema
| WBGene00001604 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y105C5B | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | gln-3 | |||||||
| Sequence_name | Y105C5B.28 | ||||||||
| Molecular_name | Y105C5B.28a | ||||||||
| Y105C5B.28a.1 | |||||||||
| CE24078 | |||||||||
| Y105C5B.28b | |||||||||
| CE39807 | |||||||||
| Y105C5B.28c | |||||||||
| CE47242 | |||||||||
| Y105C5B.28b.1 | |||||||||
| Y105C5B.28c.1 | |||||||||
| Other_name | CELE_Y105C5B.28 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | gln-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gln | ||||||||
| Allele (64) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00001602 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001603 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001606 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001607 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable glutamine synthetase activity. Predicted to be involved in glutamine biosynthetic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in Alzheimer's disease; Huntington's disease; schizophrenia; and temporal lobe epilepsy. Is an ortholog of human GLUL (glutamate-ammonia ligase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4341) | ||||
| DOID:114 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4341) | ||||||
| DOID:1070 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4341) | ||||||
| DOID:409 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4341) | ||||||
| DOID:12858 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4341) | ||||||
| DOID:5082 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4341) | ||||||
| DOID:3328 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4341) | ||||||
| DOID:5419 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4341) | ||||||
| Molecular_info | Corresponding_CDS | Y105C5B.28a | |||||||
| Y105C5B.28b | |||||||||
| Y105C5B.28c | |||||||||
| Corresponding_transcript | Y105C5B.28a.1 | ||||||||
| Y105C5B.28b.1 | |||||||||
| Y105C5B.28c.1 | |||||||||
| Other_sequence (116) | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036479 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055204 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015616 | ||||||||
| Expr1030964 | |||||||||
| Expr1158739 | |||||||||
| Expr2012099 | |||||||||
| Expr2030335 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (246) | |||||||||
| Interaction (36) | |||||||||
| Map_info | Map | IV | Position | 14.6086 | Error | 0.000885 | |||
| Positive | Positive_clone | Y105C5B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042178 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065759 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
