WormBase Tree Display for Gene: WBGene00001957

WBGene00001957 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: F48D6
  Identity: Version: 1
    Name: CGC_name: hlh-13 Person_evidence: WBPerson346
      Sequence_name: F48D6.3
      Molecular_name: F48D6.3
        F48D6.3.1
        CE07260
      Other_name: ferd-3l Accession_evidence: EMBL AF369899
        CELE_F48D6.3 Accession_evidence: NDB BX284606
      Public_name: hlh-13
    DB_info: Database: AceView gene XE869
        WormQTL gene WBGene00001957
        WormFlux gene WBGene00001957
        NDB locus_tag CELE_F48D6.3
        Panther gene CAEEL|WormBase=WBGene00001957|UniProtKB=Q20561
          family PTHR23349
        NCBI gene 185980
        RefSeq protein NM_076324.5
        SwissProt UniProtAcc Q20561
        UniProt_GCRP UniProtAcc Q20561
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hlh
    Allele (35)
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (29)
    Paralog: WBGene00000561 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00001953 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00001954 Caenorhabditis elegans From_analysis: Panther
      WBGene00001956 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003595 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00001962 Caenorhabditis elegans From_analysis: Panther
      WBGene00001981 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enables DNA-binding transcription factor binding activity. Involved in dauer exit and response to oxidative stress. Predicted to be located in nucleus. Expressed in neurons. Is an ortholog of human FERD3L (Fer3 like bHLH transcription factor). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F48D6.3
    Corresponding_transcript: F48D6.3.1
    Other_sequence (15)
    Associated_feature: WBsf648001
      WBsf662666
      WBsf662667
      WBsf978843
      WBsf980908
      WBsf980909
      WBsf1004890
      WBsf235556
    Transcription_factor: WBTranscriptionFactor000327
  Experimental_info: RNAi_result: WBRNAi00025551 Inferred_automatically: RNAi_primary
      WBRNAi00092913 Inferred_automatically: RNAi_primary
      WBRNAi00015244 Inferred_automatically: RNAi_primary
      WBRNAi00064889 Inferred_automatically: RNAi_primary
      WBRNAi00047738 Inferred_automatically: RNAi_primary
      WBRNAi00027352 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12026
      Expr12027
      Expr1015997
      Expr1151572
      Expr2012493
      Expr2030732
    Drives_construct: WBCnstr00020094
      WBCnstr00036561
    Construct_product: WBCnstr00017067
      WBCnstr00020094
      WBCnstr00036561
    Microarray_results (19)
    Expression_cluster (128)
    Interaction (39)
  Map_info: Map: X Position: -7.86039 Error: 0.016267
    Positive: Positive_clone: F48D6 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5585
        5588
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00032563
    WBPaper00034761
    WBPaper00038491
    WBPaper00045920
    WBPaper00045923
    WBPaper00055090
    WBPaper00061641
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene