WormBase Tree Display for Gene: WBGene00003107
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| WBGene00003107 | SMap | S_parent | Sequence | R166 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mab-10 | Person_evidence | WBPerson3439 | |||||
| WBPerson268 | |||||||||
| WBPerson261 | |||||||||
| Sequence_name | R166.1 | ||||||||
| Molecular_name | R166.1a | ||||||||
| R166.1a.1 | |||||||||
| CE43283 | |||||||||
| R166.1a.2 | |||||||||
| R166.1b | |||||||||
| Other_name | CELE_R166.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | mab-10 | ||||||||
| DB_info | Database | AceView | gene | 2K821 | |||||
| WormQTL | gene | WBGene00003107 | |||||||
| WormFlux | gene | WBGene00003107 | |||||||
| NDB | locus_tag | CELE_R166.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003107|UniProtKB=Q22002 | |||||||
| family | PTHR12623 | ||||||||
| NCBI | gene | 187916 | |||||||
| RefSeq | protein | NM_063867.3 | |||||||
| NR_138506.1 | |||||||||
| SwissProt | UniProtAcc | Q22002 | |||||||
| UniProt_GCRP | UniProtAcc | Q22002 | |||||||
| RNAcentral | URSid | URS0000A72B60 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 16 Jul 2007 08:40:06 | WBPerson2970 | Event | Acquires_merge | WBGene00011301 | ||||
| Acquires_merge | WBGene00011301 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mab | ||||||||
| Reference_allele | WBVar00143858 | ||||||||
| Allele (119) | |||||||||
| Legacy_information | e1248 : adult male has slightly swollen bursa reduced fan thin rays; some adult males have supernumerary molt. ES2 ME0. Hermaphrodite has slightly protruding vulva ES2. NA1. | ||||||||
| See also e1235, e1248 | |||||||||
| [C.elegansII] e1248 : adult male has slightly swollen bursa, reduced fan, thin rays; some adult males have supernumerary molt, second adult cuticle. e1248/Df more severe. ES2 ME0. Hermaphrodite has slightly protruding vulva. ES2. NA1. [Hodgkin 1983a; Link et al. 1988; CB; CL] | |||||||||
| Strain | WBStrain00004492 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Enables DNA-binding transcription factor binding activity and transcription coregulator activity. Involved in several processes, including exit from mitosis; regulation of development, heterochronic; and regulation of vulval development. Located in nucleus. Expressed in several structures, including gonad; hypodermis; pharynx; somatic nervous system; and vulval cell. Is an ortholog of human NAB1 (NGFI-A binding protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R166.1a | |||||||
| Corresponding_transcript | R166.1b | ||||||||
| R166.1a.1 | |||||||||
| R166.1a.2 | |||||||||
| Other_sequence | FC820380.1 | ||||||||
| SRC05945_1 | |||||||||
| FC819997.1 | |||||||||
| JI167243.1 | |||||||||
| JI469571.1 | |||||||||
| ACC10272_1 | |||||||||
| SR03237 | |||||||||
| EX550854.1 | |||||||||
| Associated_feature | WBsf989371 | ||||||||
| WBsf989372 | |||||||||
| WBsf989373 | |||||||||
| WBsf989374 | |||||||||
| WBsf989375 | |||||||||
| WBsf1013034 | |||||||||
| WBsf1013035 | |||||||||
| WBsf1013036 | |||||||||
| WBsf1013037 | |||||||||
| WBsf1013038 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017883 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034946 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051997 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9660 | ||||||||
| Expr9661 | |||||||||
| Expr14647 | |||||||||
| Expr1014146 | |||||||||
| Expr1031469 | |||||||||
| Expr1155639 | |||||||||
| Expr2013322 | |||||||||
| Expr2031554 | |||||||||
| Drives_construct | WBCnstr00009532 | ||||||||
| WBCnstr00014208 | |||||||||
| WBCnstr00016068 | |||||||||
| WBCnstr00036226 | |||||||||
| Construct_product | WBCnstr00009532 | ||||||||
| WBCnstr00014208 | |||||||||
| WBCnstr00016068 | |||||||||
| WBCnstr00036226 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | II | Position | 3.07397 | Error | 0.020491 | |||
| Positive | Positive_clone | R166 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 1392 | |||||||
| 1393 | |||||||||
| 1394 | |||||||||
| 1395 | |||||||||
| Pos_neg_data | 3356 | ||||||||
| 3671 | |||||||||
| 3674 | |||||||||
| 3788 | |||||||||
| 3789 | |||||||||
| 3790 | |||||||||
| Reference (19) | |||||||||
| Method | Gene |
