WormBase Tree Display for Gene: WBGene00003134
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| WBGene00003134 | SMap | S_parent | Sequence | F10C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | mat-3 | Person_evidence | WBPerson205 | |||||
| Sequence_name | F10C5.1 | ||||||||
| Molecular_name | F10C5.1 | ||||||||
| F10C5.1.1 | |||||||||
| CE26888 | |||||||||
| Other_name | pod-4 | ||||||||
| apc-8 | |||||||||
| vex-2 | CGC_data_submission | ||||||||
| cdc-23 | Paper_evidence | WBPaper00010392 | |||||||
| szy-13 | Paper_evidence | WBPaper00049084 | |||||||
| Person_evidence | WBPerson728 | ||||||||
| CELE_F10C5.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | mat-3 | ||||||||
| DB_info | Database | AceView | gene | 3B99 | |||||
| WormQTL | gene | WBGene00003134 | |||||||
| WormFlux | gene | WBGene00003134 | |||||||
| NDB | locus_tag | CELE_F10C5.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003134|UniProtKB=Q19294 | |||||||
| family | PTHR12558 | ||||||||
| NCBI | gene | 175205 | |||||||
| RefSeq | protein | NM_064802.7 | |||||||
| SwissProt | UniProtAcc | Q19294 | |||||||
| TREEFAM | TREEFAM_ID | TF101055 | |||||||
| UniProt_GCRP | UniProtAcc | Q19294 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 01 Mar 2006 08:09:39 | WBPerson2970 | Event | Acquires_merge | WBGene00077741 | ||||
| Name_change | Other_name | vex-2 | |||||||
| 3 | 07 May 2009 15:33:27 | WBPerson1847 | Event | Acquires_merge | WBGene00000385 | ||||
| 4 | 22 Jan 2016 08:31:00 | WBPerson2970 | Event | Acquires_merge | WBGene00077741 | ||||
| Name_change | Other_name | szy-13 | |||||||
| Acquires_merge | WBGene00000385 | ||||||||
| WBGene00077741 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mat | ||||||||
| Allele (163) | |||||||||
| Possibly_affected_by | WBVar02158830 | ||||||||
| Legacy_information | [Golden A] Mutation is defective in metaphase to anaphase transition. | ||||||||
| [Sundaram M] ku233 homozygotes exhibit abnormal vulval development, beginning with abnormal appearance of the Pn.pxx nuclei from both primary and secondary lineages. | |||||||||
| Complementation_data | [Sundaram M] Complements pat-4, pat-12 | ||||||||
| [] complements pat-4(st551), pat-12(st430), vab-6(e697) | |||||||||
| Strain | WBStrain00035408 | ||||||||
| WBStrain00035413 | |||||||||
| WBStrain00035706 | |||||||||
| WBStrain00037075 | |||||||||
| WBStrain00006406 | |||||||||
| WBStrain00006407 | |||||||||
| WBStrain00008573 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP3024 | ||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00001281 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00003132 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | mat-3 encodes a tetratricopeptide repeat (TPR)-containing protein that is the C. elegans ortholog of CDC23/APC8, a conserved regulatory subunit of the anaphase-promoting complex; mat-3 activity is required for progression through metaphase of oocyte meiosis I, germline proliferation, and vulval development. | Paper_evidence | WBPaper00004484 | |||||
| WBPaper00005096 | |||||||||
| WBPaper00024252 | |||||||||
| WBPaper00028738 | |||||||||
| WBPaper00029251 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 22 May 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable molecular adaptor activity. Involved in asymmetric cell division; polarity specification of anterior/posterior axis; and positive regulation of metaphase/anaphase transition of meiosis I. Predicted to be part of anaphase-promoting complex. Is an ortholog of human CDC23 (cell division cycle 23). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F10C5.1 | |||||||
| Corresponding_transcript | F10C5.1.1 | ||||||||
| Other_sequence (25) | |||||||||
| Associated_feature | WBsf224368 | ||||||||
| WBsf224369 | |||||||||
| Experimental_info | RNAi_result (45) | ||||||||
| Expr_pattern | Expr3590 | ||||||||
| Expr1025894 | |||||||||
| Expr1031479 | |||||||||
| Expr1148188 | |||||||||
| Expr2013392 | |||||||||
| Expr2031624 | |||||||||
| Construct_product | WBCnstr00011514 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction (112) | |||||||||
| Map_info | Map | III | Position | -26.8403 | Error | 0.003928 | |||
| Positive | Positive_clone | F10C5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | 2_point | 7120 | |||||||
| Multi_point | 3924 | ||||||||
| 3925 | |||||||||
| 3926 | |||||||||
| 4857 | |||||||||
| 4824 | |||||||||
| 3736 | |||||||||
| 3735 | |||||||||
| Pos_neg_data | 10571 | ||||||||
| Reference (42) | |||||||||
| Remark | Sequence connection from [Golden A] krb 02/03/28 | ||||||||
| Method | Gene |
