WormBase Tree Display for Gene: WBGene00017379
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| WBGene00017379 | SMap | S_parent | Sequence | F11C7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F11C7.7 | |||||||
| Molecular_name | F11C7.7 | ||||||||
| F11C7.7.1 | |||||||||
| CE30946 | |||||||||
| Other_name | CELE_F11C7.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F11C7.7 | ||||||||
| DB_info | Database | AceView | gene | XS13 | |||||
| WormQTL | gene | WBGene00017379 | |||||||
| WormFlux | gene | WBGene00017379 | |||||||
| NDB | locus_tag | CELE_F11C7.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017379|UniProtKB=Q8MQ78 | |||||||
| family | PTHR31936 | ||||||||
| NCBI | gene | 259353 | |||||||
| RefSeq | protein | NM_171819.4 | |||||||
| TREEFAM | TREEFAM_ID | TF317672 | |||||||
| TrEMBL | UniProtAcc | Q8MQ78 | |||||||
| UniProt_GCRP | UniProtAcc | Q8MQ78 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog | WBGene00003252 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00008851 | |||||||||
| WBGene00017376 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WBGene00017378 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in K cell; K' cell; and amphid sheath cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including nhr-49; aak-2; and daf-18 based on microarray and RNA-seq studies. Is affected by eight chemicals including hydrogen sulfide; rotenone; and antimycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Thrombospondin type-1 (TSP1) repeat; Thrombospondin type-1 (TSP1) repeat superfamily; and Thrombospondin type 1 domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F11C7.7 | |||||||
| Corresponding_transcript | F11C7.7.1 | ||||||||
| Other_sequence | CJC05759_1 | ||||||||
| Associated_feature | WBsf1025018 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044375 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1021238 | ||||||||
| Expr1148318 | |||||||||
| Expr2002445 | |||||||||
| Expr2020661 | |||||||||
| Drives_construct | WBCnstr00027341 | ||||||||
| Construct_product | WBCnstr00027341 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (85) | |||||||||
| Map_info | Positive | Positive_clone | F11C7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.0897 | |||||||
| Method | Gene |
