WormBase Tree Display for Gene: WBGene00003280
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WBGene00003280 | Evidence | Paper_evidence | WBPaper00004928 | ||||
---|---|---|---|---|---|---|---|
WBPaper00004927 | |||||||
SMap | S_parent | Sequence | Y37A1B | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001265 | |||||
Gene_class | mir | ||||||
Allele (12) | |||||||
Strain | WBStrain00027407 | ||||||
WBStrain00027417 | |||||||
WBStrain00027572 | |||||||
WBStrain00027578 | |||||||
WBStrain00050744 | |||||||
In_cluster | MIR-52 | ||||||
RNASeq_FPKM (74) | |||||||
Structured_description | Concise_description | mir-52 encodes a microRNA (miRNA), a small noncoding RNA that is likely involved in posttranscriptional regulation of gene expression; miR-52 is expressed at highest levels in L1 larvae, but is also detected at all other stages of development and in him-8 mutant animals and dauer and starved L1 larvae; biochemical studies indicate that miR-52 appears to be associated with distinct ribonucleoprotein complexes at different stages of development. | Paper_evidence | WBPaper00004928 | |||
WBPaper00006077 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Expressed in several structures, including arcade cell; coelomocyte; gonad; hypodermis; and vulva. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_transcript | Y37A1B.16 | |||||
Y37A1B.16a | |||||||
Y37A1B.16b | |||||||
Other_sequence | AJ487576 | ||||||
Associated_feature | WBsf979117 | ||||||
WBsf998494 | |||||||
WBsf998495 | |||||||
WBsf1018591 | |||||||
WBsf1018592 | |||||||
Experimental_info | Expr_pattern | Expr1665 | |||||
Expr1672 | |||||||
Expr2483 | |||||||
Expr8457 | |||||||
Expr9255 | |||||||
Drives_construct | WBCnstr00005515 | ||||||
WBCnstr00006124 | |||||||
WBCnstr00006155 | |||||||
WBCnstr00013854 | |||||||
WBCnstr00016906 | |||||||
Construct_product | WBCnstr00006155 | ||||||
WBCnstr00006512 | |||||||
WBCnstr00006513 | |||||||
WBCnstr00006514 | |||||||
Expression_cluster (26) | |||||||
Interaction (14) | |||||||
Map_info | Map | IV | Position | 11.1729 | Error | 0.004674 | |
Positive | Positive_clone | Y37A1B | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (19) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |