WormBase Tree Display for Gene: WBGene00003412
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| WBGene00003412 | SMap | S_parent | Sequence | F20B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | mrp-6 | Person_evidence | WBPerson490 | |||||
| Sequence_name | F20B6.3 | ||||||||
| Molecular_name | F20B6.3 | ||||||||
| F20B6.3.1 | |||||||||
| CE47097 | |||||||||
| Other_name | CELE_F20B6.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | mrp-6 | ||||||||
| DB_info | Database | AceView | gene | XE798 | |||||
| WormQTL | gene | WBGene00003412 | |||||||
| WormFlux | gene | WBGene00003412 | |||||||
| NDB | locus_tag | CELE_F20B6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003412|UniProtKB=Q19625 | |||||||
| family | PTHR24223 | ||||||||
| NCBI | gene | 180691 | |||||||
| RefSeq | protein | NM_001375011.2 | |||||||
| TrEMBL | UniProtAcc | Q19625 | |||||||
| UniProt_GCRP | UniProtAcc | Q19625 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:31 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mrp | ||||||||
| Allele (140) | |||||||||
| Strain | WBStrain00001479 | ||||||||
| WBStrain00031775 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00000477 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00003407 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003408 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003409 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003410 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003411 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003414 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00003413 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of human ABCC4 (ATP binding cassette subfamily C member 4 (PEL blood group)). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20B6.3 | |||||||
| Corresponding_CDS_history | F20B6.3:wp99 | ||||||||
| F20B6.3:wp230 | |||||||||
| Corresponding_transcript | F20B6.3.1 | ||||||||
| Other_sequence | FC547666.1 | ||||||||
| EX541326.1 | |||||||||
| ACC06576_1 | |||||||||
| Associated_feature | WBsf653890 | ||||||||
| WBsf670402 | |||||||||
| WBsf670403 | |||||||||
| WBsf718560 | |||||||||
| WBsf1004861 | |||||||||
| WBsf1004862 | |||||||||
| WBsf1022737 | |||||||||
| WBsf237252 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00008666 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001266 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045078 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram572 | ||||||||
| Expr5800 | |||||||||
| Expr5801 | |||||||||
| Expr1011527 | |||||||||
| Expr1031581 | |||||||||
| Expr1149028 | |||||||||
| Expr2013691 | |||||||||
| Expr2031926 | |||||||||
| Drives_construct | WBCnstr00002019 | ||||||||
| WBCnstr00002823 | |||||||||
| WBCnstr00036130 | |||||||||
| Construct_product | WBCnstr00036130 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (142) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | X | Position | -8.08861 | Error | 0.01437 | |||
| Positive | Positive_clone | F20B6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4949 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006402 | ||||||||
| WBPaper00027644 | |||||||||
| WBPaper00031484 | |||||||||
| WBPaper00031872 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041340 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064023 | |||||||||
| Remark | Sequence connection from [Sheps JA, Baillie DL] [040902 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
