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WormBase Tree Display for Gene: WBGene00004746

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Name Class

WBGene00004746SMapS_parentSequenceCHROMOSOME_X
IdentityVersion1
NameCGC_namesdc-2Person_evidenceWBPerson421
Sequence_nameC35C5.1
Molecular_nameC35C5.1
C35C5.1.1
CE18542
Other_nameCELE_C35C5.1Accession_evidenceNDBBX284606
Public_namesdc-2
DB_infoDatabaseAceViewgeneXM151
WormQTLgeneWBGene00004746
WormFluxgeneWBGene00004746
NDBlocus_tagCELE_C35C5.1
PanthergeneCAEEL|WormBase=WBGene00004746|UniProtKB=G5EBL3
familyPTHR13270
NCBIgene181341
RefSeqproteinNM_077523.7
SwissProtUniProtAccG5EBL3
TREEFAMTREEFAM_IDTF350609
UniProt_GCRPUniProtAccG5EBL3
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:36WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsdc
Allele (134)
Legacy_informationSee also y15
[C.elegansII] y15 : XX animals inviable and masculinized, XO animals WT. No maternal rescue. ES3 (XX); ME3.OA>20: y46, y74, y55 (weaker, Egl or Tra phenotypes). ???Cloned: 9.2 kb transcript, encodes predicted 2962 protein (344 kD), highly charged. [Nusbaum and Meyer 1989; TY]
StrainWBStrain00035098
WBStrain00035100
WBStrain00035166
WBStrain00035105
RNASeq_FPKM (74)
GO_annotation00009802
00009803
00009804
00009805
00009806
00009807
00009808
Ortholog (33)
ParalogWBGene00018316Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionThe sdc-2 gene encodes a protein that represses transcription of X chromosomes to achieve dosage compensation, and that also represses the male sex-determination gene her-1 to elicit hermaphrodite differentiation.Paper_evidenceWBPaper00005215
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionInvolved in dosage compensation by hypoactivation of X chromosome and negative regulation of transcription by RNA polymerase II. Located in nuclear chromosome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC35C5.1
Corresponding_transcriptC35C5.1.1
Other_sequenceAF111934
Associated_featureWBsf663360
WBsf663361
WBsf663362
WBsf663363
WBsf1007030
WBsf1007031
WBsf1023889
WBsf236384
WBsf236385
Gene_product_bindsWBsf019092
WBsf019093
Transcription_factorWBTranscriptionFactor000093
WBTranscriptionFactor000689
Experimental_infoRNAi_result (35)
Expr_patternExpr10429
Expr11875
Expr1028636
Expr1032344
Expr1145975
Expr2015659
Expr2033892
Drives_constructWBCnstr00006791
WBCnstr00015322
WBCnstr00035415
Construct_productWBCnstr00005103
WBCnstr00005104
WBCnstr00006790
WBCnstr00006791
WBCnstr00035415
AntibodyWBAntibody00000228
WBAntibody00000496
WBAntibody00000497
WBAntibody00001184
WBAntibody00002039
WBAntibody00002042
WBAntibody00002043
Microarray_results (21)
Expression_cluster (134)
InteractionWBInteraction000000038
WBInteraction000000039
WBInteraction000000040
WBInteraction000000085
WBInteraction000000086
WBInteraction000000144
WBInteraction000000145
WBInteraction000000258
WBInteraction000000459
WBInteraction000000495
WBInteraction000000895
WBInteraction000001656
WBInteraction000001657
WBInteraction000001663
WBInteraction000002892
WBInteraction000003074
WBInteraction000003110
WBInteraction000003235
WBInteraction000003237
WBInteraction000003243
WBInteraction000003418
WBInteraction000003622
WBInteraction000005253
WBInteraction000005254
WBInteraction000005256
WBInteraction000006088
WBInteraction000006157
WBInteraction000006173
WBInteraction000006257
WBInteraction000006276
WBInteraction000006333
WBInteraction000006374
WBInteraction000007795
WBInteraction000009666
WBInteraction000009779
WBInteraction000030361
WBInteraction000030844
WBInteraction000031689
WBInteraction000031692
WBInteraction000052061
WBInteraction000052062
WBInteraction000052070
WBInteraction000052072
WBInteraction000052073
WBInteraction000052075
WBInteraction000052078
WBInteraction000052459
WBInteraction000052916
WBInteraction000126263
WBInteraction000127073
WBInteraction000133743
WBInteraction000166211
WBInteraction000166212
WBInteraction000166466
WBInteraction000172102
WBInteraction000179640
WBInteraction000185230
WBInteraction000191525
WBInteraction000311373
WBInteraction000313077
WBInteraction000333765
WBInteraction000345919
WBInteraction000417210
WBInteraction000501494
WBInteraction000504064
WBInteraction000519974
WBInteraction000519984
WBInteraction000519988
WBInteraction000540686
WBInteraction000540707
WBInteraction000541629
WBInteraction000542611
WBInteraction000542642
WBInteraction000550411
WBInteraction000550412
WBInteraction000554822
WBInteraction000554823
WBProcessWBbiopr:00000056
Map_infoMapXPosition4.34757Error0.06798
Well_ordered
PositiveInside_rearryDp7
Positive_cloneC03B2
C35C5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point1438
1439
1440
1774
2062
2293
3319
3642
3643
3687
Pos_neg_data (11)
Landmark_gene
Reference (135)
MethodGene