WormBase Tree Display for Gene: WBGene00004803
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| WBGene00004803 | SMap | S_parent | Sequence | C06A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | sir-2.4 | Person_evidence | WBPerson1840 | |||||
| Sequence_name | C06A5.11 | ||||||||
| Molecular_name | C06A5.11a | ||||||||
| C06A5.11a.1 | |||||||||
| CE45549 | |||||||||
| C06A5.11b | |||||||||
| Other_name | CELE_C06A5.11 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | sir-2.4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sir | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00047283 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Contained_in_operon | CEOP1976 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00004800 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00004801 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004802 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enables RNA polymerase II-specific DNA-binding transcription factor binding activity. Involved in P granule assembly and response to heat. Located in P granule; cytoplasmic stress granule; and nuclear envelope. Part of nuclear pore. Expressed in head neurons; spermathecal-uterine valve cell; and tail neurons. Is an ortholog of human SIRT6 (sirtuin 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06A5.11a | |||||||
| Corresponding_CDS_history | C06A5.11:wp221 | ||||||||
| Corresponding_transcript | C06A5.11b | ||||||||
| C06A5.11a.1 | |||||||||
| Other_sequence | CBC02207_1 | ||||||||
| JI479068.1 | |||||||||
| CRC05912_1 | |||||||||
| CBC09265_1 | |||||||||
| CJC10352_1 | |||||||||
| Associated_feature | WBsf217734 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00091916 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00116511 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109097 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112742 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039816 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112743 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109093 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10562 | ||||||||
| Expr1014115 | |||||||||
| Expr1032383 | |||||||||
| Expr1143899 | |||||||||
| Expr2015826 | |||||||||
| Expr2034059 | |||||||||
| Drives_construct | WBCnstr00015620 | ||||||||
| WBCnstr00015621 | |||||||||
| WBCnstr00015622 | |||||||||
| WBCnstr00015623 | |||||||||
| WBCnstr00035378 | |||||||||
| Construct_product | WBCnstr00015620 | ||||||||
| WBCnstr00015621 | |||||||||
| WBCnstr00015622 | |||||||||
| WBCnstr00015623 | |||||||||
| WBCnstr00035378 | |||||||||
| Antibody | WBAntibody00002493 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (86) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Map | I | Position | 0.607029 | Error | 0.022727 | |||
| Positive | Positive_clone | C06A5 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Sequence connection from [Tissenbaum HA] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
