WormBase Tree Display for Gene: WBGene00004971
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| WBGene00004971 | SMap | S_parent | Sequence | ZK617 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | spe-17 | Person_evidence | WBPerson252 | |||||
| Sequence_name | ZK617.3 | ||||||||
| Molecular_name | ZK617.3 | ||||||||
| ZK617.3.1 | |||||||||
| CE28723 | |||||||||
| Other_name | CELE_ZK617.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | spe-17 | ||||||||
| DB_info | Database | AceView | gene | 4M779 | |||||
| WormQTL | gene | WBGene00004971 | |||||||
| WormFlux | gene | WBGene00004971 | |||||||
| NDB | locus_tag | CELE_ZK617.3 | |||||||
| NCBI | gene | 178136 | |||||||
| RefSeq | protein | NM_069874.5 | |||||||
| SwissProt | UniProtAcc | P34890 | |||||||
| TREEFAM | TREEFAM_ID | TF321408 | |||||||
| UniProt_GCRP | UniProtAcc | P34890 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spe | ||||||||
| Allele (21) | |||||||||
| Legacy_information | [C.elegansII] Mutation defined by hcDf1, hDf13; hermaphrodite brood size 3, abnormal spermatogenesis with ribosomes attaching to fibrous body-membranous organelle. Cloned: 0.56 kb transcript, encodes 142 aa novel predicted protein, highly charged, Ser and Thr rich. [L'Hernault et al. 1993; SL] | ||||||||
| Strain | WBStrain00032672 | ||||||||
| WBStrain00037145 | |||||||||
| WBStrain00037204 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00044828 | ||||||||
| 00044829 | |||||||||
| 00044830 | |||||||||
| Ortholog (16) | |||||||||
| Structured_description | Concise_description | spe-17 is predicted to encode a hydrophilic serine/threonine rich protein with no significant homology to any known protein; spe-17 is required for the proper development of spermatids into sperm during spermatogenesis and thus for fertility; specifically, spe-17 is required for the correct partitioning of organelles and sperm components into specialized Golgi-derived fibrous body-membranous organelle (FB-MO) complexes during spermatid formation. | Paper_evidence | WBPaper00001748 | |||||
| WBPaper00036251 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 12 Aug 2010 00:00:00 | ||||||||
| Automated_description | Involved in spermatid development. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK617.3 | |||||||
| Corresponding_CDS_history | ZK617.3:wp57 | ||||||||
| Corresponding_transcript | ZK617.3.1 | ||||||||
| Other_sequence | CJC03392_1 | ||||||||
| Associated_feature | WBsf716793 | ||||||||
| WBsf998010 | |||||||||
| WBsf1018308 | |||||||||
| WBsf229231 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000397 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059560 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013085 | ||||||||
| Expr1162976 | |||||||||
| Expr2016034 | |||||||||
| Drives_construct | WBCnstr00035300 | ||||||||
| WBCnstr00039980 | |||||||||
| Construct_product | WBCnstr00035300 | ||||||||
| WBCnstr00039980 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (88) | |||||||||
| WBProcess | WBbiopr:00000069 | ||||||||
| Map_info | Map | IV | Position | 5.49134 | Error | 0.013767 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | ZK617 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | |||||||||
| Reference (15) | |||||||||
| Method | Gene |
