WormBase Tree Display for Gene: WBGene00006314
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| WBGene00006314 | SMap | S_parent | Sequence | B0523 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | sup-5 | Person_evidence | WBPerson261 | |||||
| Sequence_name | B0523.t1 | ||||||||
| Molecular_name | B0523.t1 | ||||||||
| Other_name | rtw-1 | ||||||||
| sup-4 | |||||||||
| CELE_B0523.T1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | sup-5 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_B0523.T1 | |||||
| NCBI | gene | 192048 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001272 | |||||||
| Gene_class | sup | ||||||||
| Reference_allele | WBVar00144020 | ||||||||
| Allele | WBVar00144020 | Inferred_automatically | From strain object: CB1464 | ||||||
| From strain object: CB2305 | |||||||||
| From strain object: CB2317 | |||||||||
| From strain object: CB2318 | |||||||||
| WBVar00144375 | Inferred_automatically | From strain object: CB2095 | |||||||
| WBVar00144529 | |||||||||
| WBVar00144370 | |||||||||
| WBVar02141215 | |||||||||
| WBVar01500260 | |||||||||
| WBVar01499774 | |||||||||
| Legacy_information | e1464sd : amber suppressor partially or completely suppresses amber alleles of more than forty different genes; slow growing cs (sterile at 15x) otherwise no phenotype alone; probably alteration in tRNATrp gene. ES3 in presence of unc-13(e450) etc. ME1. NA > 20 all identical to e1464. | ||||||||
| e1877dm : dominant suppressor of unc-51(e369) does not suppress other alleles of unc-51. ES3 in presence of e369. NA2 (e1864). | |||||||||
| See also e1464, e1864, e1877, e2060 | |||||||||
| Strain | WBStrain00004338 | ||||||||
| WBStrain00004370 | |||||||||
| WBStrain00004391 | |||||||||
| WBStrain00004392 | |||||||||
| WBStrain00004393 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | sup-5 encodes a tryptophan tRNA; sup-5 mutations were first identified as suppressors of a subset of null mutations that affect muscle structure and assembly; further characterization indicated that sup-5 mutations function as informational suppressors that confer allele-specific suppression of nonsense mutations in many different genes by promoting readthrough of amber (UAG) chain-terminating codons. | Paper_evidence | WBPaper00000397 | |||||
| WBPaper00000768 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Nov 2005 00:00:00 | ||||||||
| Automated_description | Expressed in several structures, including body wall musculature; hermaphrodite gonad; hypodermis; intestine; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | B0523.t1 | |||||||
| Experimental_info | RNAi_result | WBRNAi00000524 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr13220 | ||||||||
| Interaction | WBInteraction000000025 | ||||||||
| WBInteraction000000240 | |||||||||
| WBInteraction000000572 | |||||||||
| WBInteraction000000573 | |||||||||
| WBInteraction000000636 | |||||||||
| WBInteraction000000674 | |||||||||
| WBInteraction000000774 | |||||||||
| WBInteraction000000848 | |||||||||
| WBInteraction000001406 | |||||||||
| WBInteraction000001468 | |||||||||
| WBInteraction000001477 | |||||||||
| WBInteraction000001478 | |||||||||
| WBInteraction000001479 | |||||||||
| WBInteraction000001480 | |||||||||
| WBInteraction000001601 | |||||||||
| WBInteraction000002418 | |||||||||
| WBInteraction000002479 | |||||||||
| WBInteraction000002494 | |||||||||
| WBInteraction000002495 | |||||||||
| WBInteraction000002496 | |||||||||
| WBInteraction000002497 | |||||||||
| WBInteraction000005322 | |||||||||
| WBInteraction000030013 | |||||||||
| WBInteraction000030132 | |||||||||
| WBInteraction000030346 | |||||||||
| WBInteraction000030349 | |||||||||
| WBInteraction000030855 | |||||||||
| WBInteraction000031068 | |||||||||
| WBInteraction000031463 | |||||||||
| WBInteraction000031778 | |||||||||
| WBInteraction000031779 | |||||||||
| WBInteraction000031780 | |||||||||
| WBInteraction000031781 | |||||||||
| WBInteraction000031782 | |||||||||
| WBInteraction000052179 | |||||||||
| WBInteraction000518854 | |||||||||
| Map_info | Map | III | Position | -0.134112 | Error | 0.010571 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | B0523 | |||||||
| SB13 | |||||||||
| Mapping_data | 2_point | 49 | |||||||
| Multi_point | 73 | ||||||||
| 74 | |||||||||
| 75 | |||||||||
| 83 | |||||||||
| 276 | |||||||||
| 752 | |||||||||
| 753 | |||||||||
| 2197 | |||||||||
| 2198 | |||||||||
| 4313 | |||||||||
| Reference (50) | |||||||||
| Remark | yk12a10.3 removed from sequence list sdm 11/00 | ||||||||
| Sequence connection updated on information from [Waterston RH]. Connection changed to B0523.t1 from B0523.5. The former lies within in an intron of the latter. [krb 020614] | |||||||||
| Method | Gene |
