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WormBase Tree Display for Gene: WBGene00006798

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Name Class

WBGene00006798SMapS_parentSequenceF56A8
IdentityVersion2
NameCGC_nameunc-64Person_evidenceWBPerson261
Sequence_nameF56A8.7
Molecular_nameF56A8.7a
F56A8.7a.1
CE16127
F56A8.7b
CE28035
F56A8.7a.2
F56A8.7b.1
Other_namesyx-1Person_evidenceWBPerson3132
CELE_F56A8.7Accession_evidenceNDBBX284603
Public_nameunc-64
DB_infoDatabaseAceViewgene3O371
WormQTLgeneWBGene00006798
WormFluxgeneWBGene00006798
NDBlocus_tagCELE_F56A8.7
PanthergeneCAEEL|WormBase=WBGene00006798|UniProtKB=O16000
familyPTHR19957
NCBIgene176743
RefSeqproteinNM_001027443.6
NM_001379980.1
SwissProtUniProtAccO16000
UniProt_GCRPUniProtAccO16000
OMIMgene600876
601485
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
216 Apr 2010 14:03:06WBPerson2970Name_changeOther_namesyx-1
StatusLive
Gene_info (11)
Disease_infoPotential_modelDOID:11949Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11433)
DOID:10487Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11433)
DOID:0111301Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:18539)
DOID:0060774Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11438)
Molecular_infoCorresponding_CDSF56A8.7a
F56A8.7b
Corresponding_transcriptF56A8.7a.1
F56A8.7a.2
F56A8.7b.1
Other_sequence (58)
Associated_featureWBsf659704
WBsf659705
WBsf659706
WBsf718014
WBsf994847
WBsf225978
WBsf225979
Experimental_infoRNAi_result (13)
Expr_pattern (14)
Drives_construct (15)
Construct_product (13)
AntibodyWBAntibody00000180
Microarray_results (28)
Expression_clusterWBPaper00035269:cde-1_regulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:A-class-motor-neurons_larva_enriched
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00040420:FLP_enriched
WBPaper00040990:PA14_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:somatic_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045314:S.aureus-induced_N2
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_upregulated_protein
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00048657:plep-1(ttTi53821)_regulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049626:UNC-75_target
WBPaper00050053:muscle_enriched_Day4
WBPaper00050344:PLM-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050514:CEBP-1_interacting
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_specific
WBPaper00051558:fog-2(q71)_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053289:DREAM-target
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056617:adr-2(gv42)_upregulated_L4_protein
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059763:neuron_expressed
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:ALM_PLM
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061527:F58F9.3_11574-R07B7.6
WBPaper00061651:DA_enriched
WBPaper00061651:DB01_enriched
WBPaper00061651:DB_enriched
WBPaper00061651:PLM_enriched
WBPaper00061651:VA12_enriched
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:etr-1(lq61)_downregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064716:paraquat_downregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065120:body-muscle-transcriptome
WBPaper00065258:anchor-cell_enriched
WBPaper00065841:22_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4489_group_9
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_upregulated
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00031003:hlh_1_enriched
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00034739:N2lessDR1350
WBPaper00034757:up_by_oxidative_stress
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00040963:Q50_down
WBPaper00040963:Q200_down
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00048563:L1_DD_enriched
WBPaper00055899:nitroguanidine_regulated
Interaction (203)
Map_infoMapIIIPosition21.1995Error0.007471
Well_ordered
PositiveInside_rearreDf2
eDp6
ctDf2
Positive_cloneB0502
C26A4
F56A8Inferred_automaticallyFrom sequence, transcript, pseudogene data
NegativeOutside_rearrtDf10
Mapping_data (3)
Landmark_gene
Reference (197)
RemarkData extracted from Ogawa et al. (1998)
MethodGene