WormBase Tree Display for Gene: WBGene00006833

WBGene00006833 SMap: S_parent: Sequence: F53F10
  Identity: Version: 2
    Name: CGC_name: unc-108 Person_evidence: WBPerson261
      Sequence_name: F53F10.4
      Molecular_name (12)
      Other_name: rab-2
        unc-67 Person_evidence: WBPerson261
        CELE_F53F10.4 Accession_evidence: NDB BX284601
      Public_name: unc-108
    DB_info: Database: AceView gene 1E393
        WormQTL gene WBGene00006833
        WormFlux gene WBGene00006833
        NDB locus_tag CELE_F53F10.4
        Panther gene CAEEL|WormBase=WBGene00006833|UniProtKB=A0A2C9C2Y0
          family PTHR47979
        NCBI gene 171956
        RefSeq protein NM_001356805.3
            NM_001393282.1
            NM_001356804.3
            NM_001356806.3
        TrEMBL UniProtAcc A0A2C9C2Y0
            A0A2C9C3C9
            O01577
            A0A2C9C379
        UniProt_GCRP UniProtAcc A0A2C9C2Y0
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 18 Nov 2008 14:39:11 WBPerson2970 Event: Acquires_merge: WBGene00006800
              Name_change: Other_name: unc-67
      Acquires_merge: WBGene00006800
    Status: Live
  Gene_info (12)
  Molecular_info: Corresponding_CDS: F53F10.4a
      F53F10.4b
      F53F10.4c
      F53F10.4d
    Corresponding_transcript: F53F10.4a.1
      F53F10.4b.1
      F53F10.4c.1
      F53F10.4d.1
    Other_sequence (24)
    Associated_feature (11)
  Experimental_info: RNAi_result (40)
    Expr_pattern (16)
    Drives_construct: WBCnstr00002664
      WBCnstr00005792
      WBCnstr00005793
      WBCnstr00013020
      WBCnstr00013022
      WBCnstr00013277
      WBCnstr00013541
      WBCnstr00019190
      WBCnstr00034128
    Construct_product (21)
    Antibody: WBAntibody00001993
      WBAntibody00001994
    Microarray_results (28)
    Expression_cluster: WBPaper00032528:L3_enriched
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00038289:oocyte_protein
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040965:lipid-droplet_associated_protein
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045314:S.aureus-induced_N2
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00046161:Q40-aggregate-protein_Day7_Sarcosyl-soluble
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050448:KGB-1-induced
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_nucleus_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:intestine_nucleus_expressed
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00051558:fog-2(q71)_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053814:25C_downregulated_PY79
      WBPaper00055049:S.gordonii_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055565:AVK_enriched
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058969:RIS_enriched
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059174:MEG-3_interacting
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061340:AIM
      WBPaper00061340:AIY
      WBPaper00061340:ALA
      WBPaper00061340:AVH
      WBPaper00061340:AVL
      WBPaper00061340:PVT
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061527:cdc-42_17192-rab-5_18073
      WBPaper00061527:nhr-46_2300-unc-108_2961
      WBPaper00061651:ADA_enriched
      WBPaper00061651:ADE_enriched
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:AVF_enriched
      WBPaper00061651:HSN_enriched
      WBPaper00061651:NSM_enriched
      WBPaper00061651:PDE_enriched
      WBPaper00061651:PVM_enriched
      WBPaper00061651:PVR_enriched
      WBPaper00061651:PVW_enriched
      WBPaper00061651:RIG_enriched
      WBPaper00061651:RIH_enriched
      WBPaper00061651:RIP_enriched
      WBPaper00061651:RIV_enriched
      WBPaper00061651:VB01_enriched
      WBPaper00061651:VB02_enriched
      WBPaper00061651:VB_enriched
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:AFD_depleted
      WBPaper00065373:sek-1(km4)_downregulated_Ref
      cgc4386_cluster_4_4
      cgc4489_group_16
      WBPaper00025032:cluster_43
      WBPaper00025032:cluster_62
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:StarveUp2
      WBPaper00034739:N2moreDR1350
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00035227:heat_shock_regulated
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.5
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042331:a-SWCNTs_downregulated
      WBPaper00048989:N2_allantoin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(143_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
    Interaction: WBInteraction000052844
      WBInteraction000114776
      WBInteraction000122826
      WBInteraction000122971
      WBInteraction000162850
      WBInteraction000180624
      WBInteraction000189318
      WBInteraction000193944
      WBInteraction000259243
      WBInteraction000282977
      WBInteraction000288048
      WBInteraction000291806
      WBInteraction000307338
      WBInteraction000314669
      WBInteraction000332919
      WBInteraction000363748
      WBInteraction000386844
      WBInteraction000403831
      WBInteraction000458335
      WBInteraction000503482
      WBInteraction000503606
      WBInteraction000504043
      WBInteraction000504044
      WBInteraction000504526
      WBInteraction000504647
      WBInteraction000504865
      WBInteraction000518363
      WBInteraction000518440
      WBInteraction000521452
      WBInteraction000521453
      WBInteraction000523887
      WBInteraction000523888
      WBInteraction000539580
      WBInteraction000539585
      WBInteraction000542045
      WBInteraction000544448
      WBInteraction000550303
      WBInteraction000553074
      WBInteraction000555740
      WBInteraction000556235
      WBInteraction000556515
      WBInteraction000559306
      WBInteraction000564373
      WBInteraction000565226
      WBInteraction000568799
      WBInteraction000573614
      WBInteraction000574451
      WBInteraction000579648
      WBInteraction000580489
      WBInteraction000585126
      WBInteraction000585839
    WBProcess: WBbiopr:00000013
      WBbiopr:00000015
  Map_info: Map: I Position: -2.00793 Error: 0.05662
    Positive: Positive_clone: F53F10 Inferred_automatically: From sequence, transcript, pseudogene data
            From CDS info
    Mapping_data: 2_point: 59
        80
        489
        490
      Multi_point: 1290
        1291
        4973
        5623
        380
        381
        1288
      Pos_neg_data: 363
  Reference (55)
  Method: Gene