WormBase Tree Display for Gene: WBGene00007703
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| WBGene00007703 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | gbf-1 | Person_evidence | WBPerson508 | |||||
| Sequence_name | C24H11.7 | ||||||||
| Molecular_name | C24H11.7a | ||||||||
| C24H11.7a.1 | |||||||||
| CE44078 | |||||||||
| C24H11.7b | |||||||||
| CE47290 | |||||||||
| C24H11.7b.1 | |||||||||
| Other_name | phi-34 | Person_evidence | WBPerson2582 | ||||||
| CELE_C24H11.7 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | gbf-1 | ||||||||
| DB_info | Database | AceView | gene | 3M842 | |||||
| WormQTL | gene | WBGene00007703 | |||||||
| WormFlux | gene | WBGene00007703 | |||||||
| NDB | locus_tag | CELE_C24H11.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007703|UniProtKB=G5EGS5 | |||||||
| family | PTHR10663 | ||||||||
| NCBI | gene | 176609 | |||||||
| RefSeq | protein | NM_001379939.1 | |||||||
| NM_001379938.2 | |||||||||
| SwissProt | UniProtAcc | G5EGS5 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGS5 | |||||||
| OMIM | gene | 603698 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Feb 2005 12:07:44 | WBPerson2970 | Name_change | CGC_name | gbf-1 | ||||
| 3 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-34 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gbf | ||||||||
| Allele (623) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00001743 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00008685 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012386 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00013223 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019726 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable guanyl-nucleotide exchange factor activity. Involved in endosomal transport; organelle organization; and secretion. Located in Golgi cis cisterna and endoplasmic reticulum exit site. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease dominant intermediate A. Is an ortholog of human GBF1 (golgi brefeldin A resistant guanine nucleotide exchange factor 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110202 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4181) | ||||
| Molecular_info | Corresponding_CDS | C24H11.7a | |||||||
| C24H11.7b | |||||||||
| Corresponding_CDS_history | C24H11.7:wp183 | ||||||||
| C24H11.7:wp206 | |||||||||
| Corresponding_transcript | C24H11.7a.1 | ||||||||
| C24H11.7b.1 | |||||||||
| Other_sequence (53) | |||||||||
| Associated_feature | WBsf667453 | ||||||||
| WBsf667454 | |||||||||
| WBsf667455 | |||||||||
| WBsf994483 | |||||||||
| WBsf994484 | |||||||||
| WBsf994485 | |||||||||
| WBsf994486 | |||||||||
| WBsf1016076 | |||||||||
| WBsf227598 | |||||||||
| Experimental_info | RNAi_result (22) | ||||||||
| Expr_pattern | Expr1029033 | ||||||||
| Expr1033332 | |||||||||
| Expr1145155 | |||||||||
| Expr2011957 | |||||||||
| Expr2030194 | |||||||||
| Antibody | WBAntibody00002462 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (79) | |||||||||
| Interaction (74) | |||||||||
| Map_info | Map | III | Position | 12.2356 | Error | 0.075847 | |||
| Positive | Positive_clone | C24H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036769 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042578 | |||||||||
| WBPaper00045696 | |||||||||
| WBPaper00047001 | |||||||||
| WBPaper00050112 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064389 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
