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WormBase Tree Display for Gene: WBGene00008830

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Name Class

WBGene00008830SMapS_parentSequenceF14H3
IdentityVersion2
NameCGC_namenhr-176Person_evidenceWBPerson600
Sequence_nameF14H3.11
Molecular_nameF14H3.11
F14H3.11.1
CE35482
Other_nameCELE_F14H3.11Accession_evidenceNDBBX284605
Public_namenhr-176
DB_infoDatabaseAceViewgene5Q551
WormQTLgeneWBGene00008830
WormFluxgeneWBGene00008830
NDBlocus_tagCELE_F14H3.11
PanthergeneCAEEL|WormBase=WBGene00008830|UniProtKB=O45365
familyPTHR46011
NCBIgene184496
RefSeqproteinNM_074644.3
SwissProtUniProtAccO45365
TREEFAMTREEFAM_IDTF323089
UniProt_GCRPUniProtAccO45365
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
222 Jul 2005 10:29:12WBPerson2970Name_changeCGC_namenhr-176
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
Allele (56)
StrainWBStrain00035357
WBStrain00035358
WBStrain00035359
RNASeq_FPKM (74)
GO_annotation (11)
OrthologWBGene00041303Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00056588Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00080949Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00095125Pristionchus pacificusFrom_analysisOMA
WBGene00136697Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00207388Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00223242Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g387Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g10900Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g4269Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g673Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g674Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g18847Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g8020Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g10498Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16058Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8063Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6011Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8218Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8219Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g534Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g539Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00124.g5009Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00124.g5010Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g21421Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00276.g8510Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02796Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_02799Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019902Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_019905Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g13533Panagrellus redivivusFrom_analysisWormBase-Compara
chrV_pilon.g17032Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00216790Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00242085Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00288616Trichuris murisFrom_analysisWormBase-Compara
Paralog (217)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF14H3.11
Corresponding_CDS_historyF14H3.11:wp109
Corresponding_transcriptF14H3.11.1
Associated_featureWBsf647619
WBsf978654
Transcription_factorWBTranscriptionFactor000988
Experimental_infoRNAi_resultWBRNAi00030967Inferred_automaticallyRNAi_primary
WBRNAi00013319Inferred_automaticallyRNAi_primary
WBRNAi00114371Inferred_automaticallyRNAi_primary
WBRNAi00113854Inferred_automaticallyRNAi_primary
WBRNAi00044651Inferred_automaticallyRNAi_primary
WBRNAi00114370Inferred_automaticallyRNAi_primary
Expr_patternChronogram73
Chronogram903
Chronogram1112
Expr7505
Expr1027684
Expr1033850
Expr1148624
Expr2014077
Expr2032317
Drives_constructWBCnstr00001167
WBCnstr00001168
WBCnstr00001169
WBCnstr00012650
WBCnstr00032651
Construct_productWBCnstr00032651
Microarray_results (22)
Expression_cluster (107)
Map_infoMapVPosition9.46034Error0.003726
PositivePositive_cloneF14H3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5313
4662
Pseudo_map_position
ReferenceWBPaper00043063
WBPaper00044018
WBPaper00046025
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene