WormBase Tree Display for Gene: WBGene00009264
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| WBGene00009264 | SMap | S_parent | Sequence | F30A10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | sacm-1L | Author_evidence | WBPerson555 | |||||
| Sequence_name | F30A10.6 | ||||||||
| Molecular_name | F30A10.6 | ||||||||
| F30A10.6.1 | |||||||||
| CE51333 | |||||||||
| Other_name | sac-1 | Author_evidence | WBPerson555 | ||||||
| CELE_F30A10.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | sacm-1L | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 26 Feb 2009 11:55:59 | WBPerson9133 | Name_change | CGC_name | sac-1 | ||||
| 3 | 10 Jul 2023 23:47:10 | WBPerson51134 | Name_change | CGC_name | sacm-1L | ||||
| Other_name | sac-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sacm | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00036372 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00086326 | ||||||||
| 00086327 | |||||||||
| 00086328 | |||||||||
| 00086329 | |||||||||
| 00117009 | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00012353 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006763 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007620 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007912 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012016 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00086546 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable phosphatidylinositol-4-phosphate phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Predicted to be located in endoplasmic reticulum. Expressed in intestine; pharyngeal neurons; pharynx; spermatheca; and tail. Is an ortholog of human SACM1L (SAC1 like phosphatidylinositide phosphatase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F30A10.6 | |||||||
| Corresponding_CDS_history | F30A10.6:wp252 | ||||||||
| Corresponding_transcript | F30A10.6.1 | ||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf643591 | ||||||||
| WBsf656755 | |||||||||
| WBsf218292 | |||||||||
| WBsf218293 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr11581 | ||||||||
| Expr14411 | |||||||||
| Expr15311 | |||||||||
| Expr1013851 | |||||||||
| Expr1034042 | |||||||||
| Expr1149857 | |||||||||
| Expr2015576 | |||||||||
| Expr2033811 | |||||||||
| Drives_construct | WBCnstr00019071 | ||||||||
| WBCnstr00032330 | |||||||||
| Construct_product | WBCnstr00032330 | ||||||||
| WBCnstr00040842 | |||||||||
| WBCnstr00042165 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (50) | |||||||||
| Map_info | Map | I | Position | 3.77339 | Error | 0.001167 | |||
| Positive | Positive_clone | F30A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031212 | ||||||||
| WBPaper00034075 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00053879 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060970 | |||||||||
| WBPaper00061449 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
