WormBase Tree Display for Gene: WBGene00009539
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| WBGene00009539 | SMap | S_parent | Sequence | F38C2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F38C2.7 | |||||||
| Molecular_name | F38C2.7 | ||||||||
| F38C2.7.1 | |||||||||
| CE16006 | |||||||||
| Other_name | CELE_F38C2.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F38C2.7 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| Strain | WBStrain00037597 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034583 | ||||||||
| 00034584 | |||||||||
| 00034585 | |||||||||
| 00117188 | |||||||||
| 00117189 | |||||||||
| Ortholog (53) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | F38C2.7 encodes a CCCH tandem zinc finger (TZF) protein; based upon its sequence similarity to other TZF proteins, such as MEX-5 and POS-1, the product of F38C2.7 is predicted to function as an RNA-binding protein. | Paper_evidence | WBPaper00029038 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 18 Sep 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable mRNA 3'-UTR binding activity. Predicted to be located in cytosol. Expressed widely. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human ZFP36 (ZFP36 ring finger protein); ZFP36L1 (ZFP36 ring finger protein like 1); and ZFP36L2 (ZFP36 ring finger protein like 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12862) | ||||
| EFO:MONDO:0014769 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1108) | ||||||
| Molecular_info | Corresponding_CDS | F38C2.7 | |||||||
| Corresponding_transcript | F38C2.7.1 | ||||||||
| Associated_feature | WBsf978618 | ||||||||
| Transcription_factor | WBTranscriptionFactor001007 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031959 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014558 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046704 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr7548 | ||||||||
| Expr10315 | |||||||||
| Expr10316 | |||||||||
| Expr1034168 | |||||||||
| Expr1150585 | |||||||||
| Expr2003477 | |||||||||
| Expr2021692 | |||||||||
| Drives_construct | WBCnstr00012693 | ||||||||
| WBCnstr00015250 | |||||||||
| WBCnstr00032116 | |||||||||
| Construct_product | WBCnstr00016548 | ||||||||
| WBCnstr00016559 | |||||||||
| WBCnstr00032116 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction (246) | |||||||||
| Map_info | Positive | Positive_clone | F38C2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 14.7534 | |||||||
| Method | Gene |
