WormBase Tree Display for Gene: WBGene00009587
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| WBGene00009587 | SMap | S_parent | Sequence | F40F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mig-38 | Person_evidence | WBPerson261 | |||||
| WBPerson5811 | |||||||||
| Sequence_name | F40F11.2 | ||||||||
| Molecular_name | F40F11.2 | ||||||||
| F40F11.2.1 | |||||||||
| CE28557 | |||||||||
| Other_name | CELE_F40F11.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | mig-38 | ||||||||
| DB_info | Database | AceView | gene | 4M365 | |||||
| WormQTL | gene | WBGene00009587 | |||||||
| WormFlux | gene | WBGene00009587 | |||||||
| NDB | locus_tag | CELE_F40F11.2 | |||||||
| NCBI | gene | 178082 | |||||||
| RefSeq | protein | NM_001268640.2 | |||||||
| SwissProt | UniProtAcc | A6ZJ71 | |||||||
| UniProt_GCRP | UniProtAcc | A6ZJ71 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Feb 2011 14:35:52 | WBPerson2970 | Name_change | CGC_name | mig-38 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mig | ||||||||
| Allele (110) | |||||||||
| Strain | WBStrain00002118 | ||||||||
| WBStrain00037021 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00005033 | ||||||||
| 00005034 | |||||||||
| 00005035 | |||||||||
| 00005036 | |||||||||
| 00117230 | |||||||||
| 00117231 | |||||||||
| 00117232 | |||||||||
| 00117233 | |||||||||
| Ortholog (20) | |||||||||
| Structured_description | Automated_description | Predicted to enable copper ion binding activity; primary amine oxidase activity; and quinone binding activity. Predicted to be involved in amine metabolic process. Predicted to be located in cytoplasm and nucleus. Expressed in gonad; head; neurons; somatic gonad precursor; and tail. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40F11.2 | |||||||
| Corresponding_CDS_history | F40F11.2:wp57 | ||||||||
| F40F11.2:wp156 | |||||||||
| F40F11.2a:wp229 | |||||||||
| F40F11.2b:wp229 | |||||||||
| Corresponding_transcript | F40F11.2.1 | ||||||||
| Other_sequence | CGC00344_1 | ||||||||
| CR05246 | |||||||||
| CRC09021_1 | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Chronogram47 | ||||||||
| Expr6008 | |||||||||
| Expr6009 | |||||||||
| Expr10160 | |||||||||
| Expr1027619 | |||||||||
| Expr1034197 | |||||||||
| Expr1150721 | |||||||||
| Expr2013572 | |||||||||
| Expr2031805 | |||||||||
| Drives_construct | WBCnstr00002885 | ||||||||
| WBCnstr00004450 | |||||||||
| WBCnstr00032080 | |||||||||
| Construct_product | WBCnstr00015115 | ||||||||
| WBCnstr00032080 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | IV | Position | 5.02593 | Error | 0.006971 | |||
| Positive | Positive_clone | F40F11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026498 | ||||||||
| WBPaper00030635 | |||||||||
| WBPaper00031006 | |||||||||
| WBPaper00033511 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041230 | |||||||||
| WBPaper00064375 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
