WormBase Tree Display for Gene: WBGene00011106
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| WBGene00011106 | SMap | S_parent | Sequence | R07E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acl-5 | Person_evidence | WBPerson1105 | |||||
| Sequence_name | R07E3.5 | ||||||||
| Molecular_name | R07E3.5a | ||||||||
| R07E3.5a.1 | |||||||||
| CE02299 | |||||||||
| R07E3.5b | |||||||||
| CE40105 | |||||||||
| R07E3.5b.1 | |||||||||
| Other_name | CELE_R07E3.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | acl-5 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00011106 | |||||
| WormFlux | gene | WBGene00011106 | |||||||
| NDB | locus_tag | CELE_R07E3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011106|UniProtKB=Q21812 | |||||||
| family | PTHR23063 | ||||||||
| NCBI | gene | 181241 | |||||||
| RefSeq | protein | NM_001047818.4 | |||||||
| NM_001047817.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF315039 | |||||||
| TrEMBL | UniProtAcc | Q21812 | |||||||
| Q1ZXU8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21812 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jul 2004 16:55:44 | WBPerson1971 | Name_change | CGC_name | acl-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acl | ||||||||
| Allele (73) | |||||||||
| Strain | WBStrain00001269 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066783 | ||||||||
| 00066784 | |||||||||
| 00066785 | |||||||||
| 00066786 | |||||||||
| 00118405 | |||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00010902 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00018657 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | acl-5 encode a glycerol-3-phosphate acyltransferase; ACL-5 proteins are predicted to function in phospholipid biosynthesis, and acl-5 expression is highly induced during dauer larval development; large-scale expression studies have reported acl-5 expression in body wall muscle and some unidentified cells in the head. | Paper_evidence | WBPaper00005654 | |||||
| WBPaper00006525 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00032488 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 25 Mar 2013 00:00:00 | ||||||||
| Automated_description | Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Located in endoplasmic reticulum. Expressed in head. Is an ortholog of human GPAT3 (glycerol-3-phosphate acyltransferase 3) and GPAT4 (glycerol-3-phosphate acyltransferase 4). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07E3.5a | |||||||
| R07E3.5b | |||||||||
| Corresponding_transcript | R07E3.5a.1 | ||||||||
| R07E3.5b.1 | |||||||||
| Other_sequence (42) | |||||||||
| Associated_feature | WBsf670947 | ||||||||
| WBsf1006673 | |||||||||
| WBsf1006674 | |||||||||
| WBsf1023697 | |||||||||
| WBsf237854 | |||||||||
| WBsf237855 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051468 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017549 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6476 | ||||||||
| Expr10829 | |||||||||
| Expr1013141 | |||||||||
| Expr1034880 | |||||||||
| Expr1155155 | |||||||||
| Expr2009156 | |||||||||
| Expr2027393 | |||||||||
| Drives_construct | WBCnstr00002164 | ||||||||
| WBCnstr00030927 | |||||||||
| Construct_product | WBCnstr00030927 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | X | Position | 1.96282 | Error | 0.018278 | |||
| Positive | Positive_clone | R07E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4886 | |||||||
| 4909 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028430 | ||||||||
| WBPaper00036603 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042228 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00042756 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
