WormBase Tree Display for Gene: WBGene00018657
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| WBGene00018657 | SMap | S_parent | Sequence | F49H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | acl-4 | Person_evidence | WBPerson1105 | |||||
| Sequence_name | F49H12.6 | ||||||||
| Molecular_name | F49H12.6a | ||||||||
| F49H12.6a.1 | |||||||||
| CE23754 | |||||||||
| F49H12.6b | |||||||||
| CE30138 | |||||||||
| F49H12.6b.1 | |||||||||
| F49H12.6b.2 | |||||||||
| Other_name | CELE_F49H12.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | acl-4 | ||||||||
| DB_info | Database | AceView | gene | XC686 | |||||
| WormQTL | gene | WBGene00018657 | |||||||
| WormFlux | gene | WBGene00018657 | |||||||
| NDB | locus_tag | CELE_F49H12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018657|UniProtKB=Q9N5S8 | |||||||
| family | PTHR23063 | ||||||||
| NCBI | gene | 180519 | |||||||
| RefSeq | protein | NM_075979.8 | |||||||
| NM_075978.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF315039 | |||||||
| TrEMBL | UniProtAcc | Q9N5S8 | |||||||
| Q9N5S9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9N5S8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Jul 2004 16:55:44 | WBPerson1971 | Name_change | CGC_name | acl-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | acl | ||||||||
| Allele (44) | |||||||||
| Strain | WBStrain00001276 | ||||||||
| WBStrain00001534 | |||||||||
| WBStrain00002239 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00095602 | ||||||||
| 00095603 | |||||||||
| 00095604 | |||||||||
| 00095605 | |||||||||
| 00123733 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00010902 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00011106 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | acl-4 encodes a phosphate acyltransferase; ACL-4 is predicted to be a membrane protein that functions in phospholipid biosynthesis; acl-4 expression can be detected in the pharynx, intestine, hypodermis, muscle, and reproductive system. | Paper_evidence | WBPaper00006525 | |||||
| WBPaper00024497 | |||||||||
| WBPaper00025054 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 10 Aug 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable acyltransferase activity, transferring groups other than amino-acyl groups. Located in endoplasmic reticulum. Is an ortholog of human GPAT3 (glycerol-3-phosphate acyltransferase 3). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49H12.6a | |||||||
| F49H12.6b | |||||||||
| Corresponding_transcript | F49H12.6a.1 | ||||||||
| F49H12.6b.1 | |||||||||
| F49H12.6b.2 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf653724 | ||||||||
| WBsf982122 | |||||||||
| WBsf1004209 | |||||||||
| WBsf1004210 | |||||||||
| WBsf1022401 | |||||||||
| WBsf1022402 | |||||||||
| WBsf237049 | |||||||||
| WBsf237050 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032567 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047890 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047891 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram906 | ||||||||
| Chronogram1666 | |||||||||
| Expr6127 | |||||||||
| Expr6128 | |||||||||
| Expr10828 | |||||||||
| Expr1013077 | |||||||||
| Expr1038029 | |||||||||
| Expr1151721 | |||||||||
| Expr2009155 | |||||||||
| Expr2027392 | |||||||||
| Drives_construct | WBCnstr00002171 | ||||||||
| WBCnstr00002383 | |||||||||
| WBCnstr00004327 | |||||||||
| WBCnstr00026350 | |||||||||
| Construct_product | WBCnstr00026350 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction | WBInteraction000047685 | ||||||||
| WBInteraction000047693 | |||||||||
| WBInteraction000356450 | |||||||||
| WBInteraction000367105 | |||||||||
| WBInteraction000367106 | |||||||||
| WBInteraction000548036 | |||||||||
| Map_info | Map | X | Position | -17.0642 | |||||
| Positive | Positive_clone | F49H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010050 | ||||||||
| WBPaper00028207 | |||||||||
| WBPaper00028690 | |||||||||
| WBPaper00030383 | |||||||||
| WBPaper00036603 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042228 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00042756 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
