WormBase Tree Display for Gene: WBGene00011614

WBGene00011614 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 3
    Name: CGC_name: nfya-1 Paper_evidence: WBPaper00030771
          Person_evidence: WBPerson716
      Sequence_name: T08D10.1
      Molecular_name: T08D10.1
        T08D10.1.1
        CE03642
      Other_name: tag-295 Person_evidence: WBPerson201
        CELE_T08D10.1 Accession_evidence: NDB BX284606
      Public_name: nfya-1
    DB_info: Database: AceView gene XM564
        WormQTL gene WBGene00011614
        WormFlux gene WBGene00011614
        NDB locus_tag CELE_T08D10.1
        Panther gene CAEEL|WormBase=WBGene00011614|UniProtKB=G5EEG1
          family PTHR12632
        NCBI gene 181368
        RefSeq protein NM_077598.5
        SwissProt UniProtAcc G5EEG1
        TREEFAM TREEFAM_ID TF322779
        UniProt_GCRP UniProtAcc G5EEG1
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Apr 2005 11:55:18 WBPerson2970 Name_change: CGC_name: tag-295
        3 16 Jul 2007 08:49:14 WBPerson2970 Name_change: CGC_name: nfya-1
                Other_name: tag-265
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nfya
    Allele (43)
    Strain: WBStrain00035268
      WBStrain00035269
      WBStrain00035270
      WBStrain00036046
      WBStrain00008581
      WBStrain00008584
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog: WBGene00050998 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00035754 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00162790 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00139834 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00128988 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00227037 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g19831 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g4117 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18238 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21156 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12541 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4297 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10466 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g2307 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6886 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6738 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00010.g825 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00044.g2405 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_X.g25296 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_01871.g23624 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03591 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07364 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13598 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0176500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20165 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242147 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00110219 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258078 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00298341 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000003206 Saccharomyces cerevisiae From_analysis: OrthoFinder
            OrthoInspector
            Panther
      FB:FBgn0035993 Drosophila melanogaster From_analysis: OrthoFinder
            OrthoInspector
            Panther
      ZFIN:ZDB-GENE-010501-1 Danio rerio From_analysis: OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-040718-491 Danio rerio From_analysis: OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:7804 Homo sapiens From_analysis: OrthoFinder
            OrthoInspector
            Panther
      MGI:97316 Mus musculus From_analysis: OrthoFinder
            OrthoInspector
            Panther
      RGD:70976 Rattus norvegicus From_analysis: OrthoFinder
            OrthoInspector
            Panther
    Paralog: WBGene00013178 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00043056 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Enables DNA-binding transcription repressor activity. Involved in negative regulation of transcription by RNA polymerase II; positive regulation of nematode male tail tip morphogenesis; and tissue development. Located in nucleus. Expressed in several structures, including excretory cell; gonad; head neurons; oocyte; and somatic nervous system. Used to study cancer. Is an ortholog of human NFYA (nuclear transcription factor Y subunit alpha). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Experimental_model: DOID:162 Homo sapiens Paper_evidence: WBPaper00062189
          Curator_confirmed: WBPerson324
          Date_last_updated: 08 Jun 2022 00:00:00
  Models_disease_asserted: WBDOannot00001237
  Molecular_info: Corresponding_CDS: T08D10.1
    Corresponding_transcript: T08D10.1.1
    Associated_feature: WBsf655710
      WBsf1007143
      WBsf1023951
      WBsf238019
      WBsf238020
      WBsf238021
      WBsf238022
    Gene_product_binds: WBsf027928
    Transcription_factor: WBTranscriptionFactor000106
      WBTranscriptionFactor001158
  Experimental_info: RNAi_result: WBRNAi00052856 Inferred_automatically: RNAi_primary
      WBRNAi00115869 Inferred_automatically: RNAi_primary
      WBRNAi00116062 Inferred_automatically: RNAi_primary
      WBRNAi00035349 Inferred_automatically: RNAi_primary
      WBRNAi00018436 Inferred_automatically: RNAi_primary
    Expr_pattern (14)
    Drives_construct: WBCnstr00001065
      WBCnstr00001090
      WBCnstr00001091
      WBCnstr00007047
      WBCnstr00008910
      WBCnstr00008912
      WBCnstr00012301
      WBCnstr00012805
      WBCnstr00030528
      WBCnstr00043042
    Construct_product: WBCnstr00012301
      WBCnstr00016527
      WBCnstr00016798
      WBCnstr00016812
      WBCnstr00030528
      WBCnstr00043042
    Microarray_results (20)
    Expression_cluster (145)
    Interaction (24)
  Map_info: Map: X Position: 6.75445 Error: 0.01218
    Positive: Positive_clone: T08D10 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5215
        5325
    Pseudo_map_position
  Reference (18)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene