WormBase Tree Display for Gene: WBGene00012084
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| WBGene00012084 | SMap | S_parent | Sequence | T27D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-15 | Person_evidence | WBPerson42 | |||||
| WBPerson103 | |||||||||
| Sequence_name | T27D1.3 | ||||||||
| Molecular_name | T27D1.3 | ||||||||
| T27D1.3.1 | |||||||||
| CE54353 | |||||||||
| T27D1.3.2 | |||||||||
| Other_name | CELE_T27D1.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | npr-15 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 May 2009 14:29:51 | WBPerson9133 | Name_change | CGC_name | npr-15 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (241) | |||||||||
| Strain | WBStrain00032127 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00055227 | ||||||||
| 00055228 | |||||||||
| 00055229 | |||||||||
| 00055230 | |||||||||
| 00055231 | |||||||||
| 00055232 | |||||||||
| 00055233 | |||||||||
| 00119271 | |||||||||
| 00119272 | |||||||||
| 00119273 | |||||||||
| Ortholog (57) | |||||||||
| Paralog | WBGene00009278 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011381 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013848 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019183 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00020319 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015559 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Expressed in amphid neurons; head neurons; and pharyngeal muscle cell. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; artery disease (multiple); and lung disease (multiple). Is an ortholog of several human genes including AGTR1 (angiotensin II receptor type 1); AGTR2 (angiotensin II receptor type 2); and APLNR (apelin receptor). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model (30) | ||||||||
| Molecular_info | Corresponding_CDS | T27D1.3 | |||||||
| Corresponding_CDS_history | T27D1.3:wp196 | ||||||||
| T27D1.3:wp281 | |||||||||
| Corresponding_transcript | T27D1.3.1 | ||||||||
| T27D1.3.2 | |||||||||
| Other_sequence | SS02666 | ||||||||
| HGC09078_1 | |||||||||
| SSC04490_1 | |||||||||
| JI482044.1 | |||||||||
| JI467586.1 | |||||||||
| HG10155 | |||||||||
| JI174765.1 | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00082554 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036028 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054305 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082649 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006193 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066927 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019327 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00072229 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00067396 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10642 | ||||||||
| Expr1023571 | |||||||||
| Expr1157849 | |||||||||
| Expr2014400 | |||||||||
| Expr2032641 | |||||||||
| Drives_construct | WBCnstr00017417 | ||||||||
| WBCnstr00030145 | |||||||||
| Construct_product | WBCnstr00017417 | ||||||||
| WBCnstr00030145 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (98) | |||||||||
| Interaction | WBInteraction000006381 | ||||||||
| WBInteraction000006850 | |||||||||
| WBInteraction000348963 | |||||||||
| WBInteraction000408689 | |||||||||
| Map_info | Map | III | Position | -4.81747 | Error | 0.04376 | |||
| Positive | Positive_clone | T27D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00065273 | |||||||||
| WBPaper00066032 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
