WormBase Tree Display for Gene: WBGene00012295
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| WBGene00012295 | SMap | S_parent | Sequence | W06B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nmat-1 | Person_evidence | WBPerson2335 | |||||
| Sequence_name | W06B3.1 | ||||||||
| Molecular_name | W06B3.1 | ||||||||
| W06B3.1.1 | |||||||||
| CE35635 | |||||||||
| W06B3.1.2 | |||||||||
| Other_name | CELE_W06B3.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nmat-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 11 May 2012 16:05:19 | WBPerson2970 | Name_change | CGC_name | nmat-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nmat | ||||||||
| Allele (59) | |||||||||
| Strain | WBStrain00054702 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00009176 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable nicotinamide-nucleotide adenylyltransferase activity and nicotinate-nucleotide adenylyltransferase activity. Predicted to be involved in NAD biosynthetic process. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 9 and spondyloepiphyseal dysplasia, sensorineural hearing loss, intellectual developmental disorder, and Leber congenital amaurosis. Is an ortholog of human NMNAT1 (nicotinamide nucleotide adenylyltransferase 1) and NMNAT3 (nicotinamide nucleotide adenylyltransferase 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0110005 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17877) | ||||
| DOID:0112290 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17877) | ||||||
| Molecular_info | Corresponding_CDS | W06B3.1 | |||||||
| Corresponding_CDS_history | W06B3.1:wp109 | ||||||||
| Corresponding_transcript | W06B3.1.1 | ||||||||
| W06B3.1.2 | |||||||||
| Other_sequence | CRC09985_1 | ||||||||
| CR03291 | |||||||||
| Associated_feature | WBsf1007157 | ||||||||
| WBsf1007158 | |||||||||
| WBsf1007159 | |||||||||
| WBsf1023959 | |||||||||
| WBsf1023960 | |||||||||
| WBsf1023961 | |||||||||
| WBsf1023962 | |||||||||
| WBsf238029 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00096474 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00096656 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019650 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096557 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054866 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096391 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036330 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018836 | ||||||||
| Expr1158411 | |||||||||
| Expr2014329 | |||||||||
| Expr2032570 | |||||||||
| Drives_construct | WBCnstr00030018 | ||||||||
| Construct_product | WBCnstr00030018 | ||||||||
| WBCnstr00038487 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (129) | |||||||||
| Interaction (65) | |||||||||
| Map_info | Map | X | Position | 6.99475 | |||||
| Positive | Positive_clone | W06B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00043679 | |||||||||
| WBPaper00047711 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
