WormBase Tree Display for Gene: WBGene00012757
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| WBGene00012757 | SMap | S_parent | Sequence | Y41C4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y41C4A.11 | |||||||
| Molecular_name | Y41C4A.11 | ||||||||
| Y41C4A.11.1 | |||||||||
| CE51769 | |||||||||
| Other_name | CELE_Y41C4A.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | Y41C4A.11 | ||||||||
| DB_info | Database | AceView | gene | 3M811 | |||||
| WormQTL | gene | WBGene00012757 | |||||||
| SignaLink | protein | WBGene00012757 | |||||||
| WormFlux | gene | WBGene00012757 | |||||||
| NDB | locus_tag | CELE_Y41C4A.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012757|UniProtKB=Q9XWU3 | |||||||
| family | PTHR23292 | ||||||||
| NCBI | gene | 29991192 | |||||||
| RefSeq | protein | NM_001346633.4 | |||||||
| TrEMBL | UniProtAcc | Q9XWU3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWU3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2016 11:57:35 | WBPerson1983 | Event | Split_into | WBGene00270321 | ||||
| Split_into | WBGene00270321 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00103863 | ||||||||
| 00103864 | |||||||||
| 00103865 | |||||||||
| 00103866 | |||||||||
| 00103867 | |||||||||
| 00105637 | |||||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00007437 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00015151 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015152 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | Y41C4A.11 encodes a divergent paralog of F38E11.5, the beta' (beta-prime) subunit of the coatomer (COPI) complex. | Paper_evidence | WBPaper00004403 | |||||
| WBPaper00005654 | |||||||||
| WBPaper00012764 | |||||||||
| WBPaper00012858 | |||||||||
| WBPaper00012863 | |||||||||
| WBPaper00012889 | |||||||||
| WBPaper00013106 | |||||||||
| WBPaper00013627 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 25 Oct 2013 00:00:00 | ||||||||
| Automated_description | Predicted to enable zinc ion binding activity. Involved in endoplasmic reticulum unfolded protein response. Acts upstream of or within IRE1-mediated unfolded protein response. Predicted to be located in lysosomal membrane. Expressed in pharynx. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41C4A.11 | |||||||
| Corresponding_CDS_history | Y41C4A.11:wp255 | ||||||||
| Corresponding_transcript | Y41C4A.11.1 | ||||||||
| Other_sequence | CBC10504_1 | ||||||||
| Associated_feature | WBsf645636 | ||||||||
| WBsf645637 | |||||||||
| WBsf225852 | |||||||||
| WBsf225853 | |||||||||
| Experimental_info | Expr_pattern | Expr11727 | |||||||
| Expr11736 | |||||||||
| Expr1026874 | |||||||||
| Expr1159838 | |||||||||
| Expr2007426 | |||||||||
| Expr2025662 | |||||||||
| Drives_construct | WBCnstr00019343 | ||||||||
| Microarray_results | SMD_Y41C4A.10 | ||||||||
| Expression_cluster (220) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Positive | Positive_clone | Y41C4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 12.009 | |||||||
| Reference | WBPaper00005432 | ||||||||
| WBPaper00032255 | |||||||||
| WBPaper00038491 | |||||||||
| Method | Gene |
