WormBase Tree Display for Gene: WBGene00012891
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| WBGene00012891 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | sorb-1 | Person_evidence | WBPerson7088 | |||||
| WBPerson240 | |||||||||
| Sequence_name | Y45F10D.13 | ||||||||
| Molecular_name (13) | |||||||||
| Other_name | tag-208 | Person_evidence | WBPerson201 | ||||||
| CELE_Y45F10D.13 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | sorb-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Dec 2004 16:59:41 | WBPerson2970 | Name_change | CGC_name | tag-208 | ||||
| 3 | 29 Jan 2010 16:18:33 | WBPerson4025 | Event | Acquires_merge | WBGene00010156 | ||||
| 4 | 22 Nov 2011 16:42:18 | WBPerson2970 | Name_change | CGC_name | sorb-1 | ||||
| Acquires_merge | WBGene00010156 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sorb | ||||||||
| Allele (301) | |||||||||
| Strain | WBStrain00032411 | ||||||||
| WBStrain00035969 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (81) | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00007983 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00015128 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021549 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00001335 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006791 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Involved in maintenance of mitochondrion location and sarcomere organization. Located in dense body; focal adhesion; and plasma membrane. Expressed in body wall musculature; non-striated muscle; and uterus. Human ortholog(s) of this gene implicated in obesity and type 2 diabetes mellitus. Is an ortholog of human SORBS1 (sorbin and SH3 domain containing 1) and SORBS2 (sorbin and SH3 domain containing 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14565) | ||||
| DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14565) | ||||||
| Molecular_info | Corresponding_CDS | Y45F10D.13a | |||||||
| Y45F10D.13c | |||||||||
| Y45F10D.13d | |||||||||
| Y45F10D.13e | |||||||||
| Corresponding_CDS_history | Y45F10D.13:wp151 | ||||||||
| Y45F10D.13a:wp211 | |||||||||
| Corresponding_transcript | Y45F10D.13b | ||||||||
| Y45F10D.13a.1 | |||||||||
| Y45F10D.13c.1 | |||||||||
| Y45F10D.13d.1 | |||||||||
| Y45F10D.13e.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf998455 | ||||||||
| WBsf998456 | |||||||||
| WBsf998457 | |||||||||
| WBsf1018570 | |||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Expr14483 | ||||||||
| Expr1012125 | |||||||||
| Expr1035702 | |||||||||
| Expr1160065 | |||||||||
| Expr2016009 | |||||||||
| Expr2034244 | |||||||||
| Drives_construct | WBCnstr00037846 | ||||||||
| WBCnstr00040907 | |||||||||
| Construct_product | WBCnstr00037846 | ||||||||
| WBCnstr00040907 | |||||||||
| Microarray_results (44) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction (160) | |||||||||
| Map_info | Map | IV | Position | 10.712 | Error | 0.001593 | |||
| Positive | Positive_clone | Y45F10D | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4952 | |||||||
| 5532 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00039806 | |||||||||
| WBPaper00053155 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061290 | |||||||||
| WBPaper00061818 | |||||||||
| WBPaper00066282 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
