WormBase Tree Display for Gene: WBGene00021549
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| WBGene00021549 | SMap | S_parent | Sequence | Y44E3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | cdap-2 | |||||||
| Sequence_name | Y44E3A.4 | ||||||||
| Molecular_name | Y44E3A.4 | ||||||||
| Y44E3A.4.1 | |||||||||
| CE48147 | |||||||||
| Other_name | Y44E3A.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y44E3A.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | cdap-2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Nov 2004 15:44:26 | WBPerson2970 | Event | Acquires_merge | WBGene00021550 | ||||
| 3 | 16 Jan 2018 11:32:43 | WBPerson1983 | Name_change | CGC_name | cdap-2 | ||||
| Acquires_merge | WBGene00021550 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cdap | ||||||||
| Allele (261) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081808 | ||||||||
| 00081809 | |||||||||
| Contained_in_operon | CEOP1912 | ||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00007983 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012891 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00015128 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to be involved in actin filament organization and cell migration. Human ortholog(s) of this gene implicated in focal segmental glomerulosclerosis 3 and immunodeficiency 61. Is an ortholog of human CD2AP (CD2 associated protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111999 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13867) | ||||
| DOID:1312 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14258) | ||||||
| DOID:0112245 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14258) | ||||||
| Molecular_info | Corresponding_CDS | Y44E3A.4 | |||||||
| Corresponding_CDS_history | Y44E3A.4:wp127 | ||||||||
| Y44E3A.4:wp236 | |||||||||
| Corresponding_transcript | Y44E3A.4.1 | ||||||||
| Other_sequence (30) | |||||||||
| Associated_feature | WBsf664027 | ||||||||
| WBsf664028 | |||||||||
| WBsf664029 | |||||||||
| WBsf983116 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr1023569 | ||||||||
| Expr1039429 | |||||||||
| Expr1160032 | |||||||||
| Expr2007534 | |||||||||
| Expr2025771 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | I | Position | -3.81869 | |||||
| Positive | Positive_clone | Y44E3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| WBPaper00064898 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
