WormBase Tree Display for Gene: WBGene00013999
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WBGene00013999 | SMap | S_parent | Sequence | ZK550 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | phyh | |||||
Allele (88) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00038025 | |||||
00038026 | ||||||
00038027 | ||||||
00120729 | ||||||
00120730 | ||||||
Ortholog (34) | ||||||
Paralog | WBGene00014000 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00044362 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable phytanoyl-CoA dioxygenase activity. Predicted to be involved in fatty acid alpha-oxidation. Expressed in nerve ring. Human ortholog(s) of this gene implicated in Refsum disease; Zellweger syndrome; and orofacial cleft. Is an ortholog of human PHYH (phytanoyl-CoA 2-hydroxylase). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:905 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | |
DOID:0050567 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | |||
DOID:906 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | |||
DOID:10582 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | |||
Molecular_info | Corresponding_CDS | ZK550.5 | ||||
Corresponding_transcript | ZK550.5.1 | |||||
Other_sequence | CJC11082_1 | |||||
Associated_feature | WBsf999011 | |||||
Experimental_info | RNAi_result | WBRNAi00038338 | Inferred_automatically | RNAi_primary | ||
WBRNAi00022059 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00059515 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00103089 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr7762 | |||||
Expr1028901 | ||||||
Expr1162932 | ||||||
Expr2008875 | ||||||
Expr2027108 | ||||||
Drives_construct | WBCnstr00012907 | |||||
Microarray_results (19) | ||||||
Expression_cluster (200) | ||||||
Interaction (205) | ||||||
Map_info | Positive | Positive_clone | ZK550 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | IV | 16.2849 | ||||
Reference | WBPaper00038491 | |||||
WBPaper00055090 | ||||||
Method | Gene |