WormBase Tree Display for Gene: WBGene00014000
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| WBGene00014000 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK550.6 | |||||||
| Molecular_name | ZK550.6 | ||||||||
| ZK550.6.1 | |||||||||
| CE20432 | |||||||||
| Other_name | yk151d7.3 | Paper_evidence | WBPaper00004460 | ||||||
| CELE_ZK550.6 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | ZK550.6 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (104) | |||||||||
| Strain | WBStrain00035297 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00013999 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00044362 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The ZK550.6 gene encodes an ortholog of the human gene PHYTANOYL-COA HYDROXYLASE (PHYH; PAHX; OMIM:602026), which when mutated leads to Refsum disease (OMIM:266500). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable phytanoyl-CoA dioxygenase activity. Predicted to be involved in fatty acid alpha-oxidation. Expressed in intestine. Human ortholog(s) of this gene implicated in Refsum disease; Zellweger syndrome; and orofacial cleft. Is an ortholog of human PHYH (phytanoyl-CoA 2-hydroxylase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:905 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||
| DOID:0050567 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
| DOID:906 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
| DOID:10582 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
| Molecular_info | Corresponding_CDS | ZK550.6 | |||||||
| Corresponding_transcript | ZK550.6.1 | ||||||||
| Other_sequence (54) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022060 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00102264 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059516 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038339 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram101 | ||||||||
| Expr7763 | |||||||||
| Expr1010877 | |||||||||
| Expr1036257 | |||||||||
| Expr1162933 | |||||||||
| Expr2008876 | |||||||||
| Expr2027109 | |||||||||
| Drives_construct | WBCnstr00001107 | ||||||||
| WBCnstr00012908 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (247) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Positive | Positive_clone | ZK550 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 16.2854 | |||||||
| Reference | WBPaper00004460 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
