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WormBase Tree Display for Gene: WBGene00014000

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Name Class

WBGene00014000SMapS_parentSequenceCHROMOSOME_IV
IdentityVersion1
NameSequence_nameZK550.6
Molecular_nameZK550.6
ZK550.6.1
CE20432
Other_nameyk151d7.3Paper_evidenceWBPaper00004460
CELE_ZK550.6Accession_evidenceNDBBX284604
Public_nameZK550.6
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (104)
StrainWBStrain00035297
RNASeq_FPKM (74)
GO_annotation (11)
OrthologWBGene00061389Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00023769Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00142127Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00110318Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00132515Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00095400Pristionchus pacificusFrom_analysisInparanoid_8
CBOVI.g11068Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10789Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4589Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9126Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g4271Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26868Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3831Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g8861Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g29145Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g3642Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23999Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00107.g4504Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g12056Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold171.g660Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01462.g21061Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13832Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_012090Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07644Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07650Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g17001Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40206100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g12858Caenorhabditis elegansFrom_analysisWormBase-Compara
SGD:S000003915Saccharomyces cerevisiaeFrom_analysisOrthoFinder
Panther
ZFIN:ZDB-GENE-050417-361Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:8940Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:891978Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:620317Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00013999Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00044362Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionThe ZK550.6 gene encodes an ortholog of the human gene PHYTANOYL-COA HYDROXYLASE (PHYH; PAHX; OMIM:602026), which when mutated leads to Refsum disease (OMIM:266500).Paper_evidenceWBPaper00004637
Curator_confirmedWBPerson1823
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable phytanoyl-CoA dioxygenase activity. Predicted to be involved in fatty acid alpha-oxidation. Expressed in intestine. Human ortholog(s) of this gene implicated in Refsum disease; Zellweger syndrome; and orofacial cleft. Is an ortholog of human PHYH (phytanoyl-CoA 2-hydroxylase).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:905Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8940)
DOID:0050567Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8940)
DOID:906Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8940)
DOID:10582Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:8940)
Molecular_infoCorresponding_CDSZK550.6
Corresponding_transcriptZK550.6.1
Other_sequence (54)
Experimental_infoRNAi_resultWBRNAi00022060Inferred_automaticallyRNAi_primary
WBRNAi00102264Inferred_automaticallyRNAi_primary
WBRNAi00059516Inferred_automaticallyRNAi_primary
WBRNAi00038339Inferred_automaticallyRNAi_primary
Expr_patternChronogram101
Expr7763
Expr1010877
Expr1036257
Expr1162933
Expr2008876
Expr2027109
Drives_constructWBCnstr00001107
WBCnstr00012908
Microarray_results (19)
Expression_cluster (247)
Interaction (38)
Map_infoPositivePositive_cloneZK550Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV16.2854
ReferenceWBPaper00004460
WBPaper00038491
WBPaper00055090
MethodGene