WormBase Tree Display for Gene: WBGene00014000
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WBGene00014000 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | ZK550.6 | |||||||
Molecular_name | ZK550.6 | ||||||||
ZK550.6.1 | |||||||||
CE20432 | |||||||||
Other_name | yk151d7.3 | Paper_evidence | WBPaper00004460 | ||||||
CELE_ZK550.6 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | ZK550.6 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (104) | |||||||||
Strain | WBStrain00035297 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (33) | |||||||||
Paralog | WBGene00013999 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00044362 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | The ZK550.6 gene encodes an ortholog of the human gene PHYTANOYL-COA HYDROXYLASE (PHYH; PAHX; OMIM:602026), which when mutated leads to Refsum disease (OMIM:266500). | Paper_evidence | WBPaper00004637 | |||||
Curator_confirmed | WBPerson1823 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable phytanoyl-CoA dioxygenase activity. Predicted to be involved in fatty acid alpha-oxidation. Expressed in intestine. Human ortholog(s) of this gene implicated in Refsum disease; Zellweger syndrome; and orofacial cleft. Is an ortholog of human PHYH (phytanoyl-CoA 2-hydroxylase). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:905 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||
DOID:0050567 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
DOID:906 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
DOID:10582 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8940) | ||||||
Molecular_info | Corresponding_CDS | ZK550.6 | |||||||
Corresponding_transcript | ZK550.6.1 | ||||||||
Other_sequence (54) | |||||||||
Experimental_info | RNAi_result | WBRNAi00022060 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00102264 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059516 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038339 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram101 | ||||||||
Expr7763 | |||||||||
Expr1010877 | |||||||||
Expr1036257 | |||||||||
Expr1162933 | |||||||||
Expr2008876 | |||||||||
Expr2027109 | |||||||||
Drives_construct | WBCnstr00001107 | ||||||||
WBCnstr00012908 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (247) | |||||||||
Interaction (38) | |||||||||
Map_info (2) | |||||||||
Reference | WBPaper00004460 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |