WormBase Tree Display for Gene: WBGene00015484
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| WBGene00015484 | SMap | S_parent | Sequence | C05D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | atgl-1 | Person_evidence | WBPerson542 | |||||
| WBPerson2105 | |||||||||
| Sequence_name | C05D11.7 | ||||||||
| Molecular_name | C05D11.7a | ||||||||
| C05D11.7a.1 | |||||||||
| CE29663 | |||||||||
| C05D11.7b | |||||||||
| CE30480 | |||||||||
| C05D11.7b.1 | |||||||||
| Other_name | CELE_C05D11.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | atgl-1 | ||||||||
| DB_info | Database (14) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Oct 2013 11:58:44 | WBPerson2970 | Name_change | CGC_name | atgl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | atgl | ||||||||
| Allele (47) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00008370 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00015241 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable triglyceride lipase activity. Predicted to be involved in lipid homeostasis and triglyceride catabolic process. Located in lipid droplet. Expressed in intestine; nerve ring; and ventral nerve cord. Used to study Chanarin-Dorfman syndrome. Human ortholog(s) of this gene implicated in several diseases, including autosomal recessive congenital ichthyosis 10; liver disease (multiple); and type 2 diabetes mellitus. Is an ortholog of human PNPLA2 (patatin like phospholipase domain containing 2) and PNPLA3 (patatin like phospholipase domain containing 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:0050729 | Homo sapiens | Paper_evidence | WBPaper00060484 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 17 May 2022 00:00:00 | ||||||||
| Potential_model | DOID:9452 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18590) | |||||
| DOID:0060719 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:21246) | ||||||
| DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18590) | ||||||
| DOID:5082 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18590) | ||||||
| DOID:0080208 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18590) | ||||||
| DOID:3393 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18590) | ||||||
| DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18590) | ||||||
| Models_disease_asserted | WBDOannot00001199 | ||||||||
| WBDOannot00001200 | |||||||||
| Molecular_info | Corresponding_CDS | C05D11.7a | |||||||
| C05D11.7b | |||||||||
| Corresponding_transcript | C05D11.7a.1 | ||||||||
| C05D11.7b.1 | |||||||||
| Other_sequence (46) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result (31) | ||||||||
| Expr_pattern | Expr5175 | ||||||||
| Expr12050 | |||||||||
| Expr15277 | |||||||||
| Expr1025379 | |||||||||
| Expr1036622 | |||||||||
| Expr1143831 | |||||||||
| Expr2009497 | |||||||||
| Expr2027734 | |||||||||
| Drives_construct | WBCnstr00004164 | ||||||||
| WBCnstr00018586 | |||||||||
| WBCnstr00042154 | |||||||||
| Construct_product | WBCnstr00020375 | ||||||||
| WBCnstr00020376 | |||||||||
| WBCnstr00020377 | |||||||||
| WBCnstr00020378 | |||||||||
| WBCnstr00020379 | |||||||||
| WBCnstr00020380 | |||||||||
| WBCnstr00020395 | |||||||||
| Antibody | WBAntibody00002631 | ||||||||
| WBAntibody00002640 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (127) | |||||||||
| Interaction (38) | |||||||||
| WBProcess | WBbiopr:00000121 | ||||||||
| Map_info | Map | III | Position | -1.28286 | |||||
| Positive | Positive_clone | C05D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (37) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
