WormBase Tree Display for Gene: WBGene00016203

WBGene00016203 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity: Version: 2
    Name: CGC_name: tag-250
      Sequence_name: C29E4.5
      Molecular_name: C29E4.5a
        C29E4.5a.1
        CE43801
        C29E4.5b
        CE43781
        C29E4.5b.1
        C29E4.5b.2
      Other_name: CELE_C29E4.5 Accession_evidence: NDB BX284603
      Public_name: tag-250
    DB_info: Database: AceView gene 3J8
        WormQTL gene WBGene00016203
        WormFlux gene WBGene00016203
        NDB locus_tag CELE_C29E4.5
        Panther gene CAEEL|WormBase=WBGene00016203|UniProtKB=P34344
          family PTHR22948
        NCBI gene 176113
        RefSeq protein NM_001026017.5
            NM_001392147.1
        SwissProt UniProtAcc P34344
        UniProt_GCRP UniProtAcc P34344
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 22 Apr 2005 11:55:18 WBPerson2970 Name_change: CGC_name: tag-250
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tag
    Allele: WBVar02034233
      WBVar01500260
      WBVar01566925
      WBVar00092560
      WBVar00061889
      WBVar00061899
      WBVar01331299
      WBVar00233797
      WBVar00061904
      WBVar00598635
      WBVar01657084
      WBVar01657085
      WBVar02015268
      WBVar00402420
      WBVar00402421
      WBVar01499774
      WBVar00402422
      WBVar00402423
      WBVar00067093
      WBVar00402424
      WBVar00402425
      WBVar00402426
      WBVar00402427
      WBVar00402428
      WBVar00402429
      WBVar00402430
      WBVar00402431
      WBVar00402432
      WBVar00841730
      WBVar00402433
      WBVar00402434
      WBVar00841731
      WBVar00841732
      WBVar00841733
      WBVar00841734
      WBVar00099762
      WBVar00841735
      WBVar00099763
      WBVar00841736
      WBVar00841737
      WBVar00841738
      WBVar00841739
      WBVar01990188
      WBVar00841740
      WBVar00841741
      WBVar00841742
      WBVar00841743
      WBVar00841744
      WBVar00841745
      WBVar00841746
      WBVar00841747
      WBVar00841748
      WBVar00841749
      WBVar00841750
      WBVar00841751
      WBVar00841752
      WBVar00841753
      WBVar00841754
      WBVar00841755
      WBVar00841756
      WBVar00841757
      WBVar00841758
      WBVar00841759
      WBVar00841760
      WBVar00841761
      WBVar00841762
      WBVar00841763
      WBVar00841764
      WBVar00841765
      WBVar00841766
      WBVar00841767
      WBVar00841768
      WBVar00841769
      WBVar00841770
      WBVar00841771
      WBVar00841772
      WBVar00841773
      WBVar00841774
      WBVar01265990
      WBVar01499474
      WBVar01479982
      WBVar01939270
      WBVar01852323
    Strain: WBStrain00036131
    RNASeq_FPKM (74)
    GO_annotation: 00041803
      00041804
      00041805
      00041806
      00041807
    Contained_in_operon: CEOP3464
    Ortholog (37)
    Paralog: WBGene00004684 Caenorhabditis elegans From_analysis: Panther
      WBGene00009052 Caenorhabditis elegans From_analysis: Panther
      WBGene00021419 Caenorhabditis elegans From_analysis: Panther
      WBGene00016977 Caenorhabditis elegans From_analysis: Panther
      WBGene00017992 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in P granule organization; piRNA processing; and spermatogenesis. Predicted to be located in P granule. Expressed in hypodermis; intestine; neurons; and pharyngeal muscle cell. Is an ortholog of human TDRD15 (tudor domain containing 15). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29E4.5a
      C29E4.5b
    Corresponding_CDS_history: C29E4.5:wp142
      C29E4.5a:wp203
      C29E4.5b:wp203
    Corresponding_transcript: C29E4.5a.1
      C29E4.5b.1
      C29E4.5b.2
    Other_sequence (26)
    Associated_feature: WBsf667115
      WBsf993191
      WBsf993192
      WBsf993193
      WBsf993194
      WBsf1015337
      WBsf1015338
      WBsf227050
  Experimental_info: RNAi_result: WBRNAi00005417 Inferred_automatically: RNAi_primary
      WBRNAi00029311 Inferred_automatically: RNAi_primary
      WBRNAi00011325 Inferred_automatically: RNAi_primary
      WBRNAi00113516 Inferred_automatically: RNAi_primary
      WBRNAi00041451 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2039
      Expr1012123
      Expr1036936
      Expr1145481
      Expr2017248
      Expr2035384
    Drives_construct: WBCnstr00028247
    Construct_product: WBCnstr00028247
    Microarray_results (28)
    Expression_cluster (69)
    Interaction: WBInteraction000215105
      WBInteraction000345783
      WBInteraction000401393
      WBInteraction000412064
      WBInteraction000416141
      WBInteraction000544162
      WBInteraction000547391
      WBInteraction000575482
  Map_info: Map: III Position: -0.494191 Error: 0.001928
    Positive: Positive_clone: C29E4 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5112
        4947
    Pseudo_map_position
  Reference: WBPaper00065308
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene