WormBase Tree Display for Gene: WBGene00016203
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WBGene00016203 | SMap | S_parent | Sequence | CHROMOSOME_III | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tag | ||||||
Allele (83) | |||||||
Strain | WBStrain00036131 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00041803 | ||||||
00041804 | |||||||
00041805 | |||||||
00041806 | |||||||
00041807 | |||||||
Contained_in_operon | CEOP3464 | ||||||
Ortholog (37) | |||||||
Paralog | WBGene00004684 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00009052 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021419 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00016977 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00017992 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to be involved in P granule organization; piRNA processing; and spermatogenesis. Predicted to be located in P granule. Expressed in hypodermis; intestine; neurons; and pharyngeal muscle cell. Is an ortholog of human TDRD15 (tudor domain containing 15). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C29E4.5a | |||||
C29E4.5b | |||||||
Corresponding_CDS_history | C29E4.5:wp142 | ||||||
C29E4.5a:wp203 | |||||||
C29E4.5b:wp203 | |||||||
Corresponding_transcript | C29E4.5a.1 | ||||||
C29E4.5b.1 | |||||||
C29E4.5b.2 | |||||||
Other_sequence (26) | |||||||
Associated_feature | WBsf667115 | ||||||
WBsf993191 | |||||||
WBsf993192 | |||||||
WBsf993193 | |||||||
WBsf993194 | |||||||
WBsf1015337 | |||||||
WBsf1015338 | |||||||
WBsf227050 | |||||||
Experimental_info | RNAi_result | WBRNAi00005417 | Inferred_automatically | RNAi_primary | |||
WBRNAi00029311 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011325 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113516 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041451 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2039 | ||||||
Expr1012123 | |||||||
Expr1036936 | |||||||
Expr1145481 | |||||||
Expr2017248 | |||||||
Expr2035384 | |||||||
Drives_construct | WBCnstr00028247 | ||||||
Construct_product | WBCnstr00028247 | ||||||
Microarray_results (28) | |||||||
Expression_cluster (69) | |||||||
Interaction | WBInteraction000215105 | ||||||
WBInteraction000345783 | |||||||
WBInteraction000401393 | |||||||
WBInteraction000412064 | |||||||
WBInteraction000416141 | |||||||
WBInteraction000544162 | |||||||
WBInteraction000547391 | |||||||
WBInteraction000575482 | |||||||
Map_info | Map | III | Position | -0.494191 | Error | 0.001928 | |
Positive | Positive_clone | C29E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5112 | |||||
4947 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00065308 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |