WormBase Tree Display for Gene: WBGene00019011
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| WBGene00019011 | SMap | S_parent | Sequence | F57C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | F57C9.4 | |||||||
| Molecular_name | F57C9.4a | ||||||||
| F57C9.4a.1 | |||||||||
| CE28474 | |||||||||
| F57C9.4b | |||||||||
| CE28475 | |||||||||
| F57C9.4c | |||||||||
| CE40970 | |||||||||
| F57C9.4b.1 | |||||||||
| F57C9.4c.1 | |||||||||
| Other_name | CELE_F57C9.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | F57C9.4 | ||||||||
| DB_info | Database | AceView | gene | 1F403 | |||||
| WormQTL | gene | WBGene00019011 | |||||||
| WormFlux | gene | WBGene00019011 | |||||||
| NDB | locus_tag | CELE_F57C9.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019011|UniProtKB=H2KYD4 | |||||||
| family | PTHR47645 | ||||||||
| NCBI | gene | 172100 | |||||||
| RefSeq | protein | NM_059058.6 | |||||||
| NM_001129017.5 | |||||||||
| NM_001372662.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF342982 | |||||||
| TrEMBL | UniProtAcc | A5A8Q6 | |||||||
| H2KYD4 | |||||||||
| H2KYD3 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYD4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 31 Aug 2012 11:56:39 | WBPerson2970 | Name_change | CGC_name | glo-2 | ||||
| 3 | 06 Dec 2012 11:30:10 | WBPerson2970 | Name_change | CGC_name | glo-2 moved to WBGene00019010 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (59) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00021517 | ||||||||
| Contained_in_operon | CEOP1204 | ||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00009866 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00010859 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011710 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012969 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019589 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019133 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022016 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004745 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00271744 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Expressed in gonad; hypodermis; and intestine. Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; and Zinc finger C2H2-type. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57C9.4a | |||||||
| F57C9.4b | |||||||||
| F57C9.4c | |||||||||
| Corresponding_transcript | F57C9.4a.1 | ||||||||
| F57C9.4b.1 | |||||||||
| F57C9.4c.1 | |||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf643247 | ||||||||
| WBsf656258 | |||||||||
| WBsf978636 | |||||||||
| WBsf217583 | |||||||||
| WBsf217584 | |||||||||
| Transcription_factor | WBTranscriptionFactor000828 | ||||||||
| Experimental_info | RNAi_result (34) | ||||||||
| Expr_pattern | Expr2078 | ||||||||
| Expr1014250 | |||||||||
| Expr1038212 | |||||||||
| Expr1152615 | |||||||||
| Expr1200064 | |||||||||
| Expr2004349 | |||||||||
| Expr2022574 | |||||||||
| Drives_construct | WBCnstr00015674 | ||||||||
| WBCnstr00026126 | |||||||||
| Construct_product | WBCnstr00015674 | ||||||||
| WBCnstr00017946 | |||||||||
| WBCnstr00019099 | |||||||||
| WBCnstr00021778 | |||||||||
| WBCnstr00026126 | |||||||||
| Antibody | WBAntibody00002361 | ||||||||
| WBAntibody00002362 | |||||||||
| Microarray_results (38) | |||||||||
| Expression_cluster (127) | |||||||||
| SAGE_tag (14) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | I | Position | -0.715557 | |||||
| Positive | Positive_clone | F57C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
