WormBase Tree Display for Gene: WBGene00019589
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| WBGene00019589 | SMap | S_parent | Sequence | K09F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | K09F6.6 | |||||||
| Molecular_name | K09F6.6 | ||||||||
| K09F6.6.1 | |||||||||
| CE52048 | |||||||||
| Other_name | CELE_K09F6.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | K09F6.6 | ||||||||
| DB_info | Database | AceView | gene | 2C566 | |||||
| WormQTL | gene | WBGene00019589 | |||||||
| WormFlux | gene | WBGene00019589 | |||||||
| NDB | locus_tag | CELE_K09F6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019589|UniProtKB=O16732 | |||||||
| family | PTHR47645 | ||||||||
| NCBI | gene | 173584 | |||||||
| RefSeq | protein | NM_001355090.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322265 | |||||||
| TrEMBL | UniProtAcc | O16732 | |||||||
| UniProt_GCRP | UniProtAcc | O16732 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Jun 2017 11:38:59 | WBPerson1983 | Event | Split_into | WBGene00271744 | ||||
| Split_into | WBGene00271744 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (57) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00009866 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010859 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011710 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012969 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00019011 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019133 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WBGene00022016 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004745 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00271744 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in ASER; DVC; and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and rrf-3 based on microarray and RNA-seq studies. Is affected by eight chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K09F6.6 | |||||||
| Corresponding_CDS_history | K09F6.6:wp82 | ||||||||
| K09F6.6:wp260 | |||||||||
| Corresponding_transcript | K09F6.6.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00001168 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1014462 | ||||||||
| Expr1154156 | |||||||||
| Expr2004992 | |||||||||
| Expr2023213 | |||||||||
| Microarray_results | GPL14144_K09F6.6_1353-1412_0.817_82_A | ||||||||
| Expression_cluster (124) | |||||||||
| Interaction | WBInteraction000267177 | ||||||||
| WBInteraction000297735 | |||||||||
| WBInteraction000418920 | |||||||||
| WBInteraction000418921 | |||||||||
| WBInteraction000418922 | |||||||||
| WBInteraction000428421 | |||||||||
| Map_info | Positive | Positive_clone | K09F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -13.8362 | |||||||
| Method | Gene |
