WormBase Tree Display for Gene: WBGene00020187
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| WBGene00020187 | SMap | S_parent | Sequence | T03F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gsp-4 | Person_evidence | WBPerson374 | |||||
| Sequence_name | T03F1.5 | ||||||||
| Molecular_name | T03F1.5 | ||||||||
| T03F1.5.1 | |||||||||
| CE13104 | |||||||||
| T03F1.5.2 | |||||||||
| T03F1.5.3 | |||||||||
| Other_name | CELE_T03F1.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gsp-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 15 Sep 2004 14:18:50 | WBPerson1971 | Name_change | CGC_name | gsp-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gsp | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (28) | |||||||||
| Contained_in_operon | CEOP1956 | ||||||||
| Ortholog (58) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Concise_description | gsp-4 encodes an ortholog of protein phosphatase 1 gamma, a Glc7/PP1 phosphatase (HGNC:PPP1CA); GSP-4 is nearly identical to GSP-3, and the two proteins appear to function redundantly during sperm development; GSP-3/4 activity is required for chromosome partitioning during sperm meiosis and for sperm motility, specifically for pseudopod development and a normal rate of pseudopodial treadmilling; in regulating sperm development, GSP-3/4 functions upstream of, and regulates the localization of, the major sperm proteins (MSPs); GSP-3/4 may also play a role in egg laying; GSP-3/4 is expresed at high levels in sperm, with strong localization seen around meiotic and mature sperm DNA. | Paper_evidence | WBPaper00028451 | |||||
| WBPaper00040337 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 10 Nov 2014 00:00:00 | ||||||||
| Automated_description | Predicted to enable protein serine/threonine phosphatase activity. Involved in regulation of pseudopodium assembly and reproductive process. Located in cytoplasm and pseudopodium. Part of chromatin. Expressed in ILsoDL; ILsoVL; anal sphincter muscle; intestine; and sperm. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T03F1.5 | |||||||
| Corresponding_transcript | T03F1.5.1 | ||||||||
| T03F1.5.2 | |||||||||
| T03F1.5.3 | |||||||||
| Other_sequence (48) | |||||||||
| Associated_feature | WBsf983256 | ||||||||
| WBsf219185 | |||||||||
| WBsf219186 | |||||||||
| WBsf219187 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052284 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00087523 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00087521 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00087522 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004120 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055022 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00087520 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00087524 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004450 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2570 | ||||||||
| Expr4209 | |||||||||
| Expr9883 | |||||||||
| Expr13145 | |||||||||
| Expr1027145 | |||||||||
| Expr1155915 | |||||||||
| Expr2012289 | |||||||||
| Expr2030525 | |||||||||
| Drives_construct | WBCnstr00010857 | ||||||||
| WBCnstr00025315 | |||||||||
| Construct_product | WBCnstr00010857 | ||||||||
| WBCnstr00025315 | |||||||||
| Antibody | WBAntibody00001141 | ||||||||
| WBAntibody00001142 | |||||||||
| WBAntibody00001143 | |||||||||
| WBAntibody00001144 | |||||||||
| WBAntibody00002730 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (220) | |||||||||
| Interaction (222) | |||||||||
| Map_info | Map | I | Position | -1.99964 | Error | 0.003425 | |||
| Positive | Positive_clone | T03F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (24) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
