WormBase Tree Display for Gene: WBGene00020586
expand all nodes | collapse all nodes | view schema
| WBGene00020586 | SMap | S_parent | Sequence | T19F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | frpr-18 | Person_evidence | WBPerson260 | |||||
| Sequence_name | T19F4.1 | ||||||||
| Molecular_name | T19F4.1a | ||||||||
| T19F4.1a.1 | |||||||||
| CE28679 | |||||||||
| T19F4.1b | |||||||||
| CE29349 | |||||||||
| T19F4.1c | |||||||||
| CE52203 | |||||||||
| T19F4.1b.1 | |||||||||
| T19F4.1c.1 | |||||||||
| Other_name | CELE_T19F4.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | frpr-18 | ||||||||
| DB_info | Database | AceView | gene | 5H353 | |||||
| WormQTL | gene | WBGene00020586 | |||||||
| WormFlux | gene | WBGene00020586 | |||||||
| NDB | locus_tag | CELE_T19F4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020586|UniProtKB=G5EEB1 | |||||||
| family | PTHR47323 | ||||||||
| NCBI | gene | 179076 | |||||||
| RefSeq | protein | NM_001356672.4 | |||||||
| NM_072345.7 | |||||||||
| NM_001356671.3 | |||||||||
| SwissProt | UniProtAcc | G5EEB1 | |||||||
| TREEFAM | TREEFAM_ID | TF316702 | |||||||
| UniProt_GCRP | UniProtAcc | G5EEB1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Dec 2011 16:46:04 | WBPerson2970 | Name_change | CGC_name | frpr-18 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | frpr | ||||||||
| Allele (49) | |||||||||
| Strain | WBStrain00032724 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (187) | |||||||||
| Structured_description | Concise_description | frpr-18 encodes, by alternative splicing, two G-protein coupled receptors for the flp-2-encoded peptides SPREPIRFamide (FLP2-A) and LRGEPIRFamide (FLP2-B); T19F4.1B protein has an extension of 30 residues more than T19F4.1A in the intracellular C-terminal region; T19F4.1A/B are probably linked to the G(q) pathway. | Paper_evidence | WBPaper00025071 | |||||
| WBPaper00044852 | |||||||||
| Person_evidence | WBPerson197 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 10 Feb 2016 00:00:00 | ||||||||
| Automated_description | Enables G protein-coupled receptor activity. Involved in G protein-coupled receptor signaling pathway; positive regulation of protein secretion; and sleep. Located in plasma membrane. Expressed in enteric muscle and neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19F4.1a | |||||||
| T19F4.1b | |||||||||
| T19F4.1c | |||||||||
| Corresponding_CDS_history | T19F4.1a:wp261 | ||||||||
| Corresponding_transcript | T19F4.1a.1 | ||||||||
| T19F4.1b.1 | |||||||||
| T19F4.1c.1 | |||||||||
| Other_sequence | PPC17509_1 | ||||||||
| JI174236.1 | |||||||||
| Oden_isotig19659 | |||||||||
| Dviv_isotig11885 | |||||||||
| Acan_isotig11359 | |||||||||
| Dviv_isotig22130 | |||||||||
| Dviv_isotig11883 | |||||||||
| Dviv_isotig11884 | |||||||||
| Dviv_isotig11882 | |||||||||
| Associated_feature | WBsf1000377 | ||||||||
| WBsf1000378 | |||||||||
| WBsf1000379 | |||||||||
| WBsf1000380 | |||||||||
| WBsf1000381 | |||||||||
| WBsf1000382 | |||||||||
| WBsf1019868 | |||||||||
| WBsf1019869 | |||||||||
| WBsf1019870 | |||||||||
| WBsf231921 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00072225 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00053558 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018862 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000682 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113670 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103535 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13088 | ||||||||
| Expr1011653 | |||||||||
| Expr1157121 | |||||||||
| Expr2011900 | |||||||||
| Expr2030137 | |||||||||
| Drives_construct | WBCnstr00025028 | ||||||||
| WBCnstr00038585 | |||||||||
| Construct_product | WBCnstr00025028 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction | WBInteraction000356676 | ||||||||
| WBInteraction000559828 | |||||||||
| WBInteraction000559833 | |||||||||
| WBInteraction000563597 | |||||||||
| Map_info | Map | V | Position | 0.389315 | |||||
| Positive | Positive_clone | T19F4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025071 | ||||||||
| WBPaper00032078 | |||||||||
| WBPaper00044852 | |||||||||
| WBPaper00050063 | |||||||||
| WBPaper00055865 | |||||||||
| WBPaper00065376 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
