WormBase Tree Display for Gene: WBGene00021101
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| WBGene00021101 | SMap | S_parent | Sequence | W08F4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W08F4.12 | |||||||
| Molecular_name | W08F4.12a | ||||||||
| W08F4.12a.1 | |||||||||
| CE51073 | |||||||||
| W08F4.12b | |||||||||
| CE51085 | |||||||||
| W08F4.12b.1 | |||||||||
| W08F4.12c | |||||||||
| W08F4.12d | |||||||||
| Other_name | CELE_W08F4.12 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | W08F4.12 | ||||||||
| DB_info | Database | AceView | gene | 2A874 | |||||
| WormQTL | gene | WBGene00021101 | |||||||
| WormFlux | gene | WBGene00021101 | |||||||
| NDB | locus_tag | CELE_W08F4.12 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021101|UniProtKB=A0A0M9JJE0 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 173451 | |||||||
| RefSeq | protein | NM_001316869.4 | |||||||
| NM_001316870.2 | |||||||||
| NR_133624.1 | |||||||||
| NR_133623.1 | |||||||||
| TrEMBL | UniProtAcc | A0A0M7RF88 | |||||||
| A0A0M9JJE0 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0M9JJE0 | |||||||
| RNAcentral | URSid | URS00008E02D1 | |||||||
| URS00008E2D9D | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrII_pilon.g3140 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (142) | |||||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell; neurons; and retrovesicular ganglion based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; rotenone; and sodium arsenite based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: F-box domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W08F4.12a | |||||||
| W08F4.12b | |||||||||
| Corresponding_CDS_history | W08F4.12:wp250 | ||||||||
| Corresponding_transcript | W08F4.12c | ||||||||
| W08F4.12d | |||||||||
| W08F4.12a.1 | |||||||||
| W08F4.12b.1 | |||||||||
| Associated_feature | WBsf649829 | ||||||||
| WBsf986446 | |||||||||
| WBsf222616 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00096474 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00096656 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019650 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096557 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055006 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096391 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054999 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033566 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022462 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027443 | ||||||||
| Expr1158530 | |||||||||
| Expr2006863 | |||||||||
| Expr2025088 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (87) | |||||||||
| Interaction | WBInteraction000547839 | ||||||||
| WBInteraction000548743 | |||||||||
| Map_info | Positive | Positive_clone | W08F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -15.5942 | |||||||
| Method | Gene |
