WormBase Tree Display for Gene: WBGene00021444
expand all nodes | collapse all nodes | view schema
| WBGene00021444 | SMap | S_parent | Sequence | Y39A3CR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ttc-7 | Paper_evidence | WBPaper00045991 | |||||
| Person_evidence | WBPerson434 | ||||||||
| Sequence_name | Y39A3CR.3 | ||||||||
| Molecular_name | Y39A3CR.3a | ||||||||
| Y39A3CR.3a.1 | |||||||||
| CE46276 | |||||||||
| Y39A3CR.3b | |||||||||
| CE46425 | |||||||||
| Y39A3CR.3b.1 | |||||||||
| Other_name | CELE_Y39A3CR.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ttc-7 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Jun 2011 13:37:54 | WBPerson1867 | Event | Acquires_merge | WBGene00194728 | ||||
| 3 | 12 Nov 2014 15:10:23 | WBPerson2970 | Name_change | CGC_name | ttc-7 | ||||
| Acquires_merge | WBGene00194728 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttc | ||||||||
| Allele (497) | |||||||||
| Strain | WBStrain00003568 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00008841 | ||||||||
| 00008842 | |||||||||
| 00008843 | |||||||||
| Contained_in_operon | CEOP3072 | ||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00000244 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00003858 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003885 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017983 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00018175 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021613 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00043992 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be involved in phosphatidylinositol phosphate biosynthetic process and protein localization to plasma membrane. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in multiple intestinal atresia. Is an ortholog of human TTC7A (tetratricopeptide repeat domain 7A) and TTC7B (tetratricopeptide repeat domain 7B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:14671 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19750) | ||||
| Molecular_info | Corresponding_CDS | Y39A3CR.3a | |||||||
| Y39A3CR.3b | |||||||||
| Corresponding_CDS_history | Y39A3CR.3:wp206 | ||||||||
| Y39A3CR.3:wp226 | |||||||||
| Corresponding_transcript | Y39A3CR.3a.1 | ||||||||
| Y39A3CR.3b.1 | |||||||||
| Other_sequence (26) | |||||||||
| Associated_feature | WBsf991407 | ||||||||
| WBsf991408 | |||||||||
| WBsf991409 | |||||||||
| WBsf1014316 | |||||||||
| WBsf1014317 | |||||||||
| WBsf1014318 | |||||||||
| WBsf1014319 | |||||||||
| WBsf1014320 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020366 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020361 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056152 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6945 | ||||||||
| Expr1020428 | |||||||||
| Expr1039369 | |||||||||
| Expr1159662 | |||||||||
| Expr2017563 | |||||||||
| Expr2035702 | |||||||||
| Drives_construct | WBCnstr00004020 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (78) | |||||||||
| Map_info | Positive | Positive_clone | Y39A3CR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -15.8459 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
