WormBase Tree Display for Gene: WBGene00021613
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WBGene00021613 | SMap | S_parent | Sequence | Y47A7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ttc-37 | Person_evidence | WBPerson959 | |||||
WBPerson27246 | |||||||||
Sequence_name | Y47A7.1 | ||||||||
Molecular_name | Y47A7.1 | ||||||||
Y47A7.1.1 | |||||||||
CE31118 | |||||||||
Other_name | CELE_Y47A7.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | ttc-37 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Feb 2017 08:21:36 | WBPerson2970 | Name_change | CGC_name | ttc-37 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ttc | ||||||||
Allele (169) | |||||||||
Strain | WBStrain00003628 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00091584 | ||||||||
00091585 | |||||||||
00125902 | |||||||||
00125903 | |||||||||
Ortholog (36) | |||||||||
Paralog | WBGene00000244 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00003858 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00003885 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00017983 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00018175 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00021444 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00043992 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to be involved in nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'. Predicted to be part of Ski complex. Human ortholog(s) of this gene implicated in trichohepatoenteric syndrome 1. Is an ortholog of human SKIC3 (SKI3 subunit of superkiller complex). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0111415 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:23639) | ||||
Molecular_info | Corresponding_CDS | Y47A7.1 | |||||||
Corresponding_transcript | Y47A7.1.1 | ||||||||
Other_sequence (19) | |||||||||
Associated_feature (12) | |||||||||
Experimental_info | RNAi_result | WBRNAi00056723 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr6986 | ||||||||
Expr1025564 | |||||||||
Expr1039456 | |||||||||
Expr1160192 | |||||||||
Expr2017562 | |||||||||
Expr2035701 | |||||||||
Drives_construct | WBCnstr00004075 | ||||||||
WBCnstr00024480 | |||||||||
Construct_product | WBCnstr00024480 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (74) | |||||||||
Interaction | WBInteraction000586768 | ||||||||
Map_info | Map | V | Position | -2.37617 | |||||
Positive | Positive_clone | Y47A7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |