WormBase Tree Display for Gene: WBGene00024335

WBGene00024335 SMap: S_parent: Sequence: cb25.fpc0022b
  Identity: Version: 4
    Name: Sequence_name: CBG01044
      Molecular_name: CBG01044
      Other_name: CBG_01044 Accession_evidence: NDB HE600951
      Public_name: CBG01044
    DB_info: Database: NDB locus_tag CBG_01044
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:54 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:05 WBPerson2970 Name_change: CGC_name: Cbr-mab-3.1
        3 13 Mar 2019 16:02:53 WBPerson4025 Event: Changed_class: CDS Pseudogene
        4 08 May 2019 10:09:28 WBPerson1983 Name_change: CGC_name: Removed
        5 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbr-mab-3.2
        6 28 Jul 2021 11:12:30 WBPerson1983 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0000336
    RNASeq_FPKM: WBls:0000002 0.38892 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.16676 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.288839 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.43611 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.577679 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.101217 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.202434 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
        0.067478 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.029867 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.149336 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 0.43202 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.625306 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0.743535 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
        1.72808 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
        0 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        4.06888 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
        0.548537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
        0.964975 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
        1.62349 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
      WBls:0000027 0.177484 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.269045 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.629651 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.403567 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.531994 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.32084 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 4.45609 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        2.43779 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        2.67762 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        2.69425 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        2.9507 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        5.322 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 0.082189 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.193291 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.22197 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.25065 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        11.8635 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        3.09741 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        3.37005 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        4.81254 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        6.48945 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        9.99617 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 0.057614 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.288068 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        0.048011 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 1.09478 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.041094 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        1.32322 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog: WBGene00003100 Caenorhabditis elegans From_analysis: OrthoMCL
            OMA
            Inparanoid_8
      WBGene00067250 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
      WBGene00160511 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
      WBGene00124378 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00093344 Pristionchus pacificus From_analysis: Inparanoid_8
    Paralog: WBGene00024336 Caenorhabditis briggsae From_analysis: Inparanoid_8
    Structured_description: Automated_description: Is an ortholog of C. elegans mab-3. In C. elegans, mab-3 is involved in negative regulation of transcription by RNA polymerase II; nematode male tail tip morphogenesis; and positive regulation of nematode male tail tip morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: CBG01044:bp194
      CBG01044:bp270
    Corresponding_pseudogene: CBG01044
  Remark: [190507 pad] The CGC name Cbr-mab-3.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210728 pad] The CGC name Cbr-mab-3.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene