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WormBase Tree Display for Gene: WBGene00093344

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Name Class

WBGene00093344SMapS_parentSequencePPA_ChrX
IdentityVersion6
NameCGC_namePpa-mab-3.2From_analysisInferred_from_orthology
Sequence_namePPA03790
Molecular_namePPA03790
PPA03790.1
PP20019
Other_nameGENEPREDICTION_SNAP300000061377
UMM-S2859-10.65Person_evidenceWBPerson606
Ppa-mab-3From_analysisInferred_from_orthology
Public_namePpa-mab-3.2
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-mab-3.2
Other_namePpa-mab-3
308 Feb 2019 15:42:26WBPerson1983Name_changeCGC_namePpa-mab-3
Other_namePpa-mab-3.2
408 May 2019 10:09:27WBPerson1983Name_changeCGC_namePpa-mab-3.2
Other_namePpa-mab-3
528 May 2021 19:05:19WBPerson1983Name_changeCGC_namePpa-mab-3
Other_namePpa-mab-3.2
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-mab-3.2
Other_namePpa-mab-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmab
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00175004
00175005
00175006
OrthologWBGene00003100Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00024335Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00024336Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00067250Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00160511Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00124378Caenorhabditis japonicaFrom_analysisInparanoid_8
ParalogWBGene00095857Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00202685Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272718Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279162Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279770Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281033Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281418Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans mab-3. In C. elegans, mab-3 is involved in negative regulation of transcription by RNA polymerase II; nematode male tail tip morphogenesis; and positive regulation of nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA03790
Corresponding_transcriptPPA03790.1
Experimental_infoMicroarray_resultsGPL14372_Probes_2093
GPL14372_Probes_2094
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
MethodGene