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WormBase Tree Display for Gene: WBGene00025328

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Name Class

WBGene00025328SMapS_parentSequencecb25.fpc0053
IdentityVersion2
NameCGC_nameCbr-ndk-1From_analysisInferred_from_orthology
Sequence_nameCBG02247
Molecular_nameCBG02247
CBG02247.1
CBP00550
Other_nameCBG_02247Accession_evidenceNDBHE601486
Public_nameCbr-ndk-1
DB_infoDatabaseNDBlocus_tagCBG_02247
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:54WBPerson1971EventImportedInitial conversion from brigace
229 Mar 2011 15:24:49WBPerson2970Name_changeCGC_nameCbr-ndk-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classndk
RNASeq_FPKMWBls:00000021104.73From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
911.085From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
925.657From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
980.491From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1014.43From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1015.19From_analysisRNASeq.briggsae.WBls:0000002.control_median
1116.23From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:0000003365.936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
377.681From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
389.427From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
410.12From_analysisRNASeq.briggsae.WBls:0000003.control_mean
474.997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:0000004349.97From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
352.068From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
354.165From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
374.299From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
382.033From_analysisRNASeq.briggsae.WBls:0000004.control_mean
398.808From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
432.925From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:0000027360.593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
536.103From_analysisRNASeq.briggsae.WBls:0000027.control_mean
617.691From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
630.026From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
537.139From_analysisRNASeq.briggsae.WBls:0000027.control_mean
540.245From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
578.968From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035893.504From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381662.98From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
561.571From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
738.933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
786.329From_analysisRNASeq.briggsae.WBls:0000038.control_median
833.725From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
949.302From_analysisRNASeq.briggsae.WBls:0000038.control_mean
WBls:0000041519.81From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
746.955From_analysisRNASeq.briggsae.WBls:0000041.control_mean
793.202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
815.068From_analysisRNASeq.briggsae.WBls:0000041.control_median
836.933From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
837.873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
527.425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
591.433From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
684.446From_analysisRNASeq.briggsae.WBls:0000041.control_mean
692.318From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:00000631401.32From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
789.574From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
825.23From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
856.94From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
897.66From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
954.145From_analysisRNASeq.briggsae.WBls:0000063.control_mean
862.302From_analysisRNASeq.briggsae.WBls:0000063.control_median
867.664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
939.731From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:0000101776.199From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
833.725From_analysisRNASeq.briggsae.total_over_all_stages.control_median
732.468From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
791.388From_analysisRNASeq.briggsae.total_over_all_stages.control_median
GO_annotation00128695
00128696
00128697
00128698
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to enable nucleoside diphosphate kinase activity. Predicted to be involved in CTP biosynthetic process; GTP biosynthetic process; and UTP biosynthetic process. Is an ortholog of C. elegans ndk-1. In C. elegans, ndk-1 is involved in several processes, including positive regulation of MAPK cascade; positive regulation of vulval development; and regulation of cellular component organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02247
Corresponding_CDS_historyCBG02247:bp194
Corresponding_transcriptCBG02247.1
Other_sequence (389)
Experimental_infoExpr_patternExpr1050143
Microarray_resultsGPL8303_CB6_WBGene00025328_A
GPL8303_CB6_WBGene00025328_B
GPL8303_CB6_WBGene00025328_C
GPL14143_CBG02247_68-127_0.843_3_B
GPL14143_CBG02247_154-213_0.805_8_C
GPL14143_CBG02247_409-468_0.952_1_A
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_downregulated
MethodGene