WormBase Tree Display for Gene: WBGene00028947

WBGene00028947 SMap: S_parent: Sequence: cb25.fpc0156
  Identity: Version: 2
    Name: CGC_name: Cbr-pck-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG06707
      Molecular_name: CBG06707
        CBG06707.1
        CBP01677
      Other_name: CBG_06707 Accession_evidence: NDB HE601320
      Public_name: Cbr-pck-3
    DB_info: Database: NDB locus_tag CBG_06707
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:58 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 24 Feb 2012 10:20:43 WBPerson2970 Name_change: CGC_name: Cbr-pck-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pck
    RNASeq_FPKM: WBls:0000002 0.72332 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        1.16957 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        1.31123 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        2.04081 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.853434 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
        1.0115 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        1.19678 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
      WBls:0000003 0.07669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBls:0000003.control_median
        0.096149 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.115609 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        0.0641 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.046193 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.092386 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.050156 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        0.087007 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.106032 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.18646 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 0.027553 From_analysis: RNASeq.briggsae.WBls:0000024.control_median
        0.03518 From_analysis: RNASeq.briggsae.WBls:0000024.control_mean
        0.055106 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392711
        0.085613 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP011366.SRX127748
        0.112024 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311786
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311790
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311791
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392709
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP034522.SRX392710
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311787
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311788
            RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0.063026 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        0.088678 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.203009 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        0.118892 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0.133017 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        0.209535 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0.39489 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.082604 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        0.151105 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        1.69464 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        2.19685 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        3.23818 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        5.31552 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.013813 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.029441 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.030107 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.030773 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        102.561 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        25.6588 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        38.2282 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        44.3891 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        76.4256 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        87.2743 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 14.9236 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        16.2285 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        17.3854 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        18.2498 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        22.7544 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        13.7672 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        16.8069 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        7.98503 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.092386 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.58829 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.133357 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        9.58292 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00132402
      00132403
      00132404
      00132405
    Ortholog (28)
    Paralog: WBGene00023849 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00030101 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and phosphoenolpyruvate carboxykinase activity. Predicted to be involved in gluconeogenesis. Is an ortholog of C. elegans pck-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG06707
    Corresponding_CDS_history: CBG06707:bp194
      CBG06707:bp255
    Corresponding_transcript: CBG06707.1
    Other_sequence: CJC10317_1
      CSC00338_1
      CRC07803_1
      CBC02021_1
      CR07123
      Dviv_isotig22979
      FD516361.1
  Experimental_info: Expr_pattern: Expr1064099
    Microarray_results: GPL8303_CB6_WBGene00028947_A
      GPL8303_CB6_WBGene00028947_B
      GPL14143_CBG06707_1424-1483_0.833_88_C
      GPL14143_CBG06707_1589-1648_0.935_9_A
      GPL14143_CBG06707_1706-1765_0.957_1_B
  Method: Gene