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WormBase Tree Display for Gene: WBGene00029035

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Name Class

WBGene00029035SMapS_parentSequencecb25.fpc0201
IdentityVersion3
NameCGC_nameCbr-lin-12.2From_analysisInferred_from_orthology
Sequence_nameCBG06826
Molecular_nameCBG06826
CBG06826.1
CBP43142
Other_nameCBG_06826Accession_evidenceNDBHE601347
Cbr-lin-12.2From_analysisInferred_from_orthology
Cbr-lin-12From_analysisInferred_from_orthology
Public_nameCbr-lin-12.2
DB_infoDatabaseNDBlocus_tagCBG_06826
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:58WBPerson1971EventImportedInitial conversion from brigace
221 Apr 2008 17:10:50WBPerson2970Name_changeCGC_nameCbr-lin-12
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbr-lin-12.2
Other_nameCbr-lin-12
428 Jul 2021 11:12:28WBPerson1983Name_changeCGC_nameCbr-lin-12
Other_nameCbr-lin-12.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlin
Allele (14)
RNASeq_FPKMWBls:00000021.37593From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
1.41016From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
1.43383From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.51541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.400319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.17545From_analysisRNASeq.briggsae.WBls:0000002.control_mean
1.39304From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000311.8319From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
15.4303From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
19.0286From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
12.3505From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
14.4037From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000411.5735From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
13.2558From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
9.89123From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.9641From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
11.7297From_analysisRNASeq.briggsae.WBls:0000004.control_mean
11.7611From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
12.7763From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.141498From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.223937From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
0.839642From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.15349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
0.630664From_analysisRNASeq.briggsae.WBls:0000027.control_median
0.889079From_analysisRNASeq.briggsae.WBls:0000027.control_mean
1.03739From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000351.04926From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.252841From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.28091From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
1.80315From_analysisRNASeq.briggsae.WBls:0000038.control_mean
2.00383From_analysisRNASeq.briggsae.WBls:0000038.control_median
2.72676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
2.9521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:00000411.35176From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
1.7966From_analysisRNASeq.briggsae.WBls:0000041.control_mean
1.83563From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
1.85976From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.88389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
2.11511From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.56477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
1.85061From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.35249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.211543From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.230445From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.269321From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.445386From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0.45923From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0.221051From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.225748From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.261276From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001011.37593From_analysisRNASeq.briggsae.total_over_all_stages.control_median
2.83179From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
1.40111From_analysisRNASeq.briggsae.total_over_all_stages.control_median
3.56711From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00132494
Ortholog (36)
ParalogWBGene00029022Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00029134Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029037Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of C. elegans lin-12. In C. elegans, lin-12 is involved in several processes, including egg-laying behavior; nematode larval development; and positive regulation of mesodermal cell fate specification.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG06826
Corresponding_CDS_historyCBG06826:bp194
CBG06826:bp212
CBG06826:bp255
Corresponding_transcriptCBG06826.1
Other_sequence (13)
Experimental_infoExpression_clusterWBPaper00059178:Cbr-spr-4(gu163)_upregulated
ReferenceWBPaper00031365
MethodGene