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WormBase Tree Display for Gene: WBGene00029840

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Name Class

WBGene00029840SMapS_parentSequencecb25.fpc1402b
IdentityVersion2
NameCGC_nameCbr-pigl-1From_analysisInferred_from_orthology
Sequence_nameCBG07954
Molecular_nameCBG07954
CBG07954.1
CBP34354
Other_nameCBG_07954Accession_evidenceNDBHE600996
Public_nameCbr-pigl-1
DB_infoDatabaseNDBlocus_tagCBG_07954
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:59WBPerson1971EventImportedInitial conversion from brigace
208 Feb 2019 15:42:26WBPerson1983Name_changeCGC_nameCbr-pigl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpigl
Allele (21)
RNASeq_FPKMWBls:000000219.691From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
21.8679From_analysisRNASeq.briggsae.WBls:0000002.control_mean
22.1249From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
23.7879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
20.0388From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
21.0819From_analysisRNASeq.briggsae.WBls:0000002.control_median
21.4107From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000322.6409From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
29.0285From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
35.4161From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
30.1031From_analysisRNASeq.briggsae.WBls:0000003.control_mean
32.2522From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000433.2509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
35.3501From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
37.4492From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
32.0935From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
36.6246From_analysisRNASeq.briggsae.WBls:0000004.control_mean
38.9757From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
41.3538From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002712.4256From_analysisRNASeq.briggsae.WBls:0000027.control_mean
2.11207From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
27.6285From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
7.53635From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
12.0156From_analysisRNASeq.briggsae.WBls:0000027.control_median
13.4429From_analysisRNASeq.briggsae.WBls:0000027.control_mean
16.4948From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003517.071From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.7992From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
16.0219From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
19.4244From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.8402From_analysisRNASeq.briggsae.WBls:0000038.control_mean
22.827From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
31.7125From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004124.7902From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
27.5761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
29.2728From_analysisRNASeq.briggsae.WBls:0000041.control_median
29.4941From_analysisRNASeq.briggsae.WBls:0000041.control_mean
30.9694From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
34.6408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
25.3621From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
26.3426From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
26.9594From_analysisRNASeq.briggsae.WBls:0000041.control_median
28.2802From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:000006332.915From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
33.4778From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
36.2427From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
36.3479From_analysisRNASeq.briggsae.WBls:0000063.control_mean
36.9083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
42.1955From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
22.1761From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
33.9859From_analysisRNASeq.briggsae.WBls:0000063.control_mean
34.8602From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:000010125.2615From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
26.1801From_analysisRNASeq.briggsae.total_over_all_stages.control_median
25.9914From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
26.2614From_analysisRNASeq.briggsae.total_over_all_stages.control_median
Ortholog (28)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase; GlcNAc-PI de-N-acetylase; Putative deacetylase LmbE-like domain superfamily; and N-acetylglucosaminyl phosphatidylinositol deacetylase-related. Is an ortholog of C. elegans pigl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG07954
Corresponding_CDS_historyCBG07954:bp194
Corresponding_transcriptCBG07954.1
Other_sequence (21)
Experimental_infoExpr_patternExpr1063427
Expr1065393
Microarray_resultsGPL8303_CB6_WBGene00029840_A
GPL8303_CB6_WBGene00029840_B
GPL8303_CB6_WBGene00029841_A
GPL8303_CB6_WBGene00029841_B
GPL14143_CBG07954_502-561_0.923_1_A
GPL14143_CBG07955_363-422_0.918_1_A
MethodGene