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WormBase Tree Display for Gene: WBGene00030533

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Name Class

WBGene00030533SMapS_parentSequencecb25.fpc2114
IdentityVersion2
NameCGC_nameCbr-tig-2From_analysisInferred_from_orthology
Sequence_nameCBG08804
Molecular_nameCBG08804a
CBG08804a.1
CBP35048
CBG08804b
CBP41093
CBG08804b.1
Other_nameCBG_08804Accession_evidenceNDBHE601187
Public_nameCbr-tig-2
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-tig-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtig
RNASeq_FPKMWBls:00000025.09795From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
7.44045From_analysisRNASeq.briggsae.WBls:0000002.control_mean
8.35235From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
8.87106From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
3.68371From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
6.50127From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.72515From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.106313From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.457911From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.80951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0.576513From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.813717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000042.16609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
2.31099From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
2.45589From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
1.53314From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
1.60891From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
1.63533From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
1.87987From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:00000271.32544From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.56949From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.73993From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.32485From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
14.501From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
4.94717From_analysisRNASeq.briggsae.WBls:0000027.control_median
6.43019From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003513.7378From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003810.2603From_analysisRNASeq.briggsae.WBls:0000038.control_mean
13.8868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
1.96291From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
19.9523From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
5.23909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
9.56295From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000412.71284From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.62535From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.80356From_analysisRNASeq.briggsae.WBls:0000041.control_median
3.98177From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
4.79287From_analysisRNASeq.briggsae.WBls:0000041.control_mean
8.85151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
10.3107From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
14.2521From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
6.41664From_analysisRNASeq.briggsae.WBls:0000041.control_median
7.28904From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630.793919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
0.972982From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.29664From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.1353From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
2.58098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.55414From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.02095From_analysisRNASeq.briggsae.WBls:0000063.control_mean
5.64249From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001013.62535From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.801From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
3.65453From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.61079From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00133913
00133914
OrthologWBGene00006570Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00058009Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00133460Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00141739Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00150332Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g88Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14521Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18992Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14540Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5666Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g3505Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5255Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1264Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17507Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g13735Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00096.g4241Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-tig-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21577Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01494.g21274Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05297Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_019306Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00101Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21144Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50078900Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00233036Brugia malayiFrom_analysisWormBase-Compara
chrV_pilon.g14059Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00243151Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00283028Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257823Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291676Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00038298Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039598Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00040440Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042912Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable growth factor activity. Predicted to be located in extracellular region. Is an ortholog of C. elegans tig-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG08804a
CBG08804b
Corresponding_CDS_historyCBG08804:bp194
Corresponding_transcriptCBG08804a.1
CBG08804b.1
Other_sequenceHbac_isotig07518
CJC09002_1
GO240378.1
JI173018.1
Acan_isotig17116
Hbac_isotig01669
Tcol_isotig18783
Experimental_infoExpr_patternExpr1051700
Microarray_resultsGPL8303_CB6_WBGene00030533_A
GPL8303_CB6_WBGene00030533_B
GPL14143_CBG08804_794-853_0.927_3_B
GPL14143_CBG08804_951-1010_0.776_72_A
GPL14143_CBG08804_1006-1065_0.936_2_C
MethodGene